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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032191 through 18771 annotations produced 1 hits



(CG5734):

Annotation Number : CG5734
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032191
Gbrowse : chr2L:10204756-10206962 (-) // 100.0 //
Probeset : 1623989_at
Accessions : protein= NP_609353;, nucleotide= NM_135509;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0032191.
BioGrid reports that CG5734 interacts with CG6987 .
VDRC has 2 RNAi stocks for FBgn0032191 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain542 154 of 4 1.90Up
Head373 54 of 4 1.30Up
Eye591 234 of 4 2.13Up
Thoracicoabdominal ganglion658 284 of 4 2.40Up
Salivary gland204 114 of 4 0.74Down
Crop305 74 of 4 1.10None
Midgut218 84 of 4 0.80Down
Tubule309 114 of 4 1.10Up
Hindgut209 64 of 4 0.80Down
Heart310 54 of 4 1.12Up
Fat body341 124 of 4 1.22Up
Ovary534 124 of 4 1.90Up
Testis76 64 of 4 0.30Down
Male accessory glands219 154 of 4 0.80Down
Virgin spermatheca388 244 of 4 1.39Up
Mated spermatheca451 284 of 4 1.62Up
Adult carcass197 144 of 4 0.70Down
Larval CNS422 124 of 4 1.52Up
Larval Salivary gland500 94 of 4 1.80Up
Larval midgut580 354 of 4 2.08Up
Larval tubule332 44 of 4 1.20Up
Larval hindgut418 414 of 4 1.50Up
Larval fat body366 334 of 4 1.30None
Larval trachea361 224 of 4 1.30Up
Larval carcass276 64 of 4 0.99None
S2 cells (growing)800 374 of 4 2.87Up
Whole fly278 104 of 4

Looking for FBgn0032191. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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