Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032224 through 18771 annotations produced 1 hits



chr2L:10342725-10344228 (+) // 100.0 // (Selenophosphate synthetase 2):

Annotation Number : CG5025
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1630013_s_at
Accessions : protein= , nucleotide= NP_477477; /// NP_477478;
Pathway : 0016260 // selenocysteine biosynthetic process // inferred from sequence or structural similarity /// 0016260 // selenoc
FlyMine data for full length.
BioGrid reports that CG5025 interacts with CG6660 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain206 ± 74 of 4 0.90None
Head290 ± 114 of 4 1.30Up
Eye276 ± 124 of 4 1.24Up
Thoracicoabdominal ganglion212 ± 134 of 4 1.00None
Salivary gland294 ± 284 of 4 1.32None
Crop359 ± 84 of 4 1.60Up
Midgut216 ± 154 of 4 1.00None
Tubule1012 ± 274 of 4 4.50Up
Hindgut315 ± 74 of 4 1.40Up
Heart338 ± 194 of 4 1.52Up
Fat body398 ± 74 of 4 1.79Up
Ovary274 ± 64 of 4 1.20Up
Testis92 ± 54 of 4 0.40Down
Male accessory glands411 ± 204 of 4 1.80Up
Virgin spermatheca662 ± 564 of 4 2.97Up
Mated spermatheca689 ± 454 of 4 3.09Up
Adult carcass290 ± 174 of 4 1.30Up
Larval CNS245 ± 134 of 4 1.10None
Larval Salivary gland151 ± 84 of 4 0.68Down
Larval midgut186 ± 144 of 4 0.84None
Larval tubule713 ± 474 of 4 3.20Up
Larval hindgut220 ± 94 of 4 0.99None
Larval fat body122 ± 104 of 4 0.50Down
Larval trachea306 ± 314 of 4 1.37Up
Larval carcass223 ± 84 of 4 1.00None
S2 cells (growing)116 ± 84 of 4 0.52Down
Whole fly222 ± 104 of 4

Looking for FBgn0032224. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime