FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032231 through 18771 annotations produced 1 hits

(CG5056):

Annotation Number : CG5056
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032231
Gbrowse : chr2L:10366697-10367829 (+) // 100.0 //
Probeset : 1639604_at
Accessions : protein= NP_609391;, nucleotide= NM_135547;
FlyMine data for FBgn0032231.
BDGP gene expression has embryonic in situ data for CG5056: 4 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0032231 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	109 ± 5	4 of 4	0.70	Down
Head	68 ± 1	4 of 4	0.40	Down
Eye	101 ± 4	4 of 4	0.61	Down
Thoracicoabdominal ganglion	85 ± 4	4 of 4	0.50	Down
Salivary gland	77 ± 5	4 of 4	0.47	Down
Crop	97 ± 3	4 of 4	0.60	Down
Midgut	88 ± 3	4 of 4	0.50	Down
Tubule	49 ± 1	4 of 4	0.30	Down
Hindgut	76 ± 2	4 of 4	0.50	Down
Heart	87 ± 5	4 of 4	0.52	Down
Fat body	58 ± 10	4 of 4	0.35	Down
Ovary	342 ± 3	4 of 4	2.00	Up
Testis	203 ± 5	4 of 4	1.20	Up
Male accessory glands	75 ± 3	4 of 4	0.50	Down
Virgin spermatheca	66 ± 2	4 of 4	0.40	Down
Mated spermatheca	55 ± 2	4 of 4	0.33	Down
Adult carcass	60 ± 2	4 of 4	0.40	Down
Larval CNS	83 ± 1	4 of 4	0.50	Down
Larval Salivary gland	52 ± 2	4 of 4	0.31	Down
Larval midgut	77 ± 7	4 of 4	0.46	Down
Larval tubule	165 ± 7	4 of 4	1.00	None
Larval hindgut	51 ± 2	4 of 4	0.31	Down
Larval fat body	119 ± 11	4 of 4	0.70	Down
Larval trachea	93 ± 7	4 of 4	0.56	Down
Larval carcass	53 ± 5	4 of 4	0.32	Down
S2 cells (growing)	83 ± 3	4 of 4	0.50	Down
Whole fly	167 ± 7	4 of 4

Looking for FBgn0032231. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720