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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032233 through 18771 annotations produced 1 hits



dpr19 (dpr19):

Annotation Number : CG13140
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032233
Gbrowse : chr2L:10376491-10379908 (+) // 100.0 //
Probeset : 1641390_at
Accessions : protein= NP_609392;, nucleotide= NM_135548;
FlyMine data for FBgn0032233.
BioGrid reports that CG13140 interacts with CG17739 .
VDRC has 3 RNAi stocks for FBgn0032233 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain748 ± 194 of 428.70Up
Head215 ± 224 of 4 8.30Up
Eye100 ± 54 of 4 3.86Up
Thoracicoabdominal ganglion684 ± 124 of 426.30Up
Salivary gland4 ± 10 of 4 0.17Down
Crop28 ± 14 of 4 1.10None
Midgut9 ± 04 of 4 0.40Down
Tubule2 ± 00 of 4 0.10Down
Hindgut4 ± 02 of 4 0.20Down
Heart4 ± 10 of 4 0.18Down
Fat body1 ± 10 of 4 0.05Down
Ovary1 ± 00 of 4 0.10Down
Testis2 ± 01 of 4 0.10Down
Male accessory glands17 ± 14 of 4 0.70Down
Virgin spermatheca0 ± 00 of 4 0.03Down
Mated spermatheca5 ± 01 of 4 0.20Down
Adult carcass10 ± 02 of 4 0.40Down
Larval CNS422 ± 424 of 416.21Up
Larval Salivary gland4 ± 01 of 4 0.16Down
Larval midgut4 ± 01 of 4 0.16Down
Larval tubule1 ± 00 of 4 0.10Down
Larval hindgut3 ± 02 of 4 0.12Down
Larval fat body4 ± 11 of 4 0.20Down
Larval trachea3 ± 22 of 4 0.15Down
Larval carcass5 ± 04 of 4 0.20Down
S2 cells (growing)1 ± 00 of 4 0.05Down
Whole fly26 ± 24 of 4

Looking for FBgn0032233. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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