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FlyAtlas: the Drosophila gene expression atlas

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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032243 through 18771 annotations produced 1 hits



Klp31E (Klp31E):

Annotation Number : CG5300
Flybase ID : FBgn0032243
Gbrowse : chr2L:10414033-10418991 (+) // 100.0 //
Probeset : 1639527_at
Accessions : protein= NP_001162935; /// NP_001162936; /// NP_001162937; /// NP_609398;, nucleotide= NM_001169464; /// NM_001169465; /// NM_001169466; /// NM_135554;
Pathway : 0005737 // cytoplasm // inferred from sequence or structural similarity /// 0005871 // kinesin complex // inferred from
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003774 // motor activity // inferred from sequ
FlyMine data for FBgn0032243.
BDGP gene expression has embryonic in situ data for Klp31E: 4 pix of staining in 1 body parts.
Homophila reports that CG5300 is a close match (8e-51) to human gene KIF5A;NKHC;SPG10 (NP_004975), a gene associated with Spastic paraplegia 10, 604187 (3).
BioGrid reports that CG5300 interacts with CG8079 CG8301 .
TRiP has 2 RNAi stocks for FBgn0032243 available for purchase.
VDRC has 3 RNAi stocks for FBgn0032243 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain117 34 of 4 1.40Up
Head92 64 of 4 1.10None
Eye98 34 of 4 1.15None
Thoracicoabdominal ganglion134 84 of 4 1.60Up
Salivary gland272 44 of 4 3.20Up
Crop281 174 of 4 3.30Up
Midgut63 74 of 4 0.70None
Tubule139 54 of 4 1.60Up
Hindgut162 44 of 4 1.90Up
Heart103 104 of 4 1.22None
Fat body70 84 of 4 0.83None
Ovary161 44 of 4 1.90Up
Testis31 14 of 4 0.40Down
Male accessory glands43 14 of 4 0.50Down
Virgin spermatheca130 84 of 4 1.53Up
Mated spermatheca132 104 of 4 1.55Up
Adult carcass96 114 of 4 1.10None
Larval CNS90 44 of 4 1.07None
Larval Salivary gland44 64 of 4 0.52Down
Larval midgut54 34 of 4 0.64Down
Larval tubule170 104 of 4 2.00Up
Larval hindgut135 54 of 4 1.59Up
Larval fat body70 74 of 4 0.80None
Larval trachea143 84 of 4 1.69Up
Larval carcass121 54 of 4 1.43Up
S2 cells (growing)182 34 of 4 2.14Up
Whole fly85 54 of 4

Looking for FBgn0032243. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime