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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0032266 through 18771 annotations produced 1 hits


(CG18302):

Annotation Number : CG18302
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032266
Gbrowse : chr2L:10534972-10536315 (+) // 100.0 //
Probeset : 1627678_at
Accessions : protein= NP_609420;, nucleotide= NM_135576;
FlyMine data for FBgn0032266.
Homophila reports that CG18302 is a close match (1e-51) to human gene LIPA (NP_000226), a gene associated with Cholesteryl ester storage disease (3);Wolman disease (3).
VDRC has 1 RNAi stocks for FBgn0032266 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.10Down
Head153 ± 114 of 4 9.90Up
Eye83 ± 54 of 4 5.45Up
Thoracicoabdominal ganglion0 ± 00 of 4 0.10Down
Salivary gland4 ± 10 of 4 0.26Down
Crop1 ± 00 of 4 0.10Down
Midgut1 ± 00 of 4 0.10Down
Tubule1 ± 00 of 4 0.10Down
Hindgut3 ± 10 of 4 0.20Down
Heart18 ± 24 of 4 1.19None
Fat body11 ± 51 of 4 0.77None
Ovary2 ± 10 of 4 0.10Down
Testis1 ± 00 of 4 0.10Down
Male accessory glands3 ± 10 of 4 0.20Down
Virgin spermatheca4 ± 10 of 4 0.26Down
Mated spermatheca4 ± 10 of 4 0.29Down
Adult carcass53 ± 74 of 4 3.50Up
Larval CNS9 ± 51 of 4 0.61None
Larval Salivary gland4 ± 10 of 4 0.30Down
Larval midgut3 ± 10 of 4 0.24Down
Larval tubule1 ± 00 of 4 0.10Down
Larval hindgut1 ± 00 of 4 0.09Down
Larval fat body2 ± 10 of 4 0.20Down
Larval trachea3 ± 20 of 4 0.21Down
Larval carcass4 ± 10 of 4 0.27Down
S2 cells (growing)0 ± 00 of 4 0.04Down
Whole fly15 ± 22 of 4

Looking for FBgn0032266. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime