FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032269 through 18771 annotations produced 1 hits

world cup (w-cup):

Annotation Number : CG7363
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032269
Gbrowse : chr2L:10575855-10577792 (-) // 100.0 //
Probeset : 1627807_at
Accessions : protein= NP_609423;, nucleotide= NM_135579;
FlyMine data for FBgn0032269.
VDRC has 2 RNAi stocks for FBgn0032269 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.00	Down
Head	4 ± 1	0 of 4	0.00	Down
Eye	6 ± 1	1 of 4	0.02	Down
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.00	Down
Salivary gland	4 ± 2	0 of 4	0.01	Down
Crop	7 ± 3	0 of 4	0.00	Down
Midgut	4 ± 2	0 of 4	0.00	Down
Tubule	7 ± 1	0 of 4	0.00	Down
Hindgut	2 ± 0	0 of 4	0.00	Down
Heart	6 ± 0	1 of 4	0.02	Down
Fat body	9 ± 1	1 of 4	0.03	Down
Ovary	2 ± 0	0 of 4	0.00	Down
Testis	2605 ± 94	4 of 4	7.20	Up
Male accessory glands	12 ± 4	1 of 4	0.00	Down
Virgin spermatheca	2 ± 0	0 of 4	0.01	Down
Mated spermatheca	15 ± 5	1 of 4	0.04	Down
Adult carcass	15 ± 5	1 of 4	0.00	Down
Larval CNS	1 ± 1	0 of 4	0.00	Down
Larval Salivary gland	2 ± 1	0 of 4	0.01	Down
Larval midgut	5 ± 2	0 of 4	0.01	Down
Larval tubule	3 ± 0	0 of 4	0.00	Down
Larval hindgut	3 ± 0	0 of 4	0.01	Down
Larval fat body	373 ± 212	4 of 4	1.00	None
Larval trachea	18 ± 27	1 of 4	0.05	Down
Larval carcass	4 ± 1	0 of 4	0.01	Down
S2 cells (growing)	3 ± 1	0 of 4	0.01	Down
Whole fly	359 ± 27	4 of 4

Looking for FBgn0032269. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720