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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032271 through 18771 annotations produced 1 hits



(CG7329):

Annotation Number : CG7329
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032271
Gbrowse : chr2L:10629351-10631053 (-) // 100.0 //
Probeset : 1640044_at
Accessions : protein= NP_609425;, nucleotide= NM_135581;
Interpro : 0004806 // triglyceride lipase activity // inferred from sequence or structural similarity /// 0004806 // triglyceride l
FlyMine data for FBgn0032271.
Homophila reports that CG7329 is a close match (5e-54) to human gene LIPA (NP_000226), a gene associated with Cholesteryl ester storage disease (3);Wolman disease (3).
VDRC has 2 RNAi stocks for FBgn0032271 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.10Down
Head5 ± 10 of 4 0.30Down
Eye2 ± 00 of 4 0.13Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.10Down
Salivary gland2 ± 00 of 4 0.10Down
Crop6 ± 20 of 4 0.30Down
Midgut5 ± 20 of 4 0.30Down
Tubule3 ± 10 of 4 0.20Down
Hindgut1 ± 00 of 4 0.10Down
Heart2 ± 00 of 4 0.12Down
Fat body7 ± 30 of 4 0.36Down
Ovary3 ± 10 of 4 0.20Down
Testis124 ± 114 of 4 6.10Up
Male accessory glands567 ± 364 of 427.80Up
Virgin spermatheca2 ± 10 of 4 0.12Down
Mated spermatheca7 ± 20 of 4 0.35Down
Adult carcass11 ± 30 of 4 0.50None
Larval CNS2 ± 10 of 4 0.10Down
Larval Salivary gland5 ± 20 of 4 0.26Down
Larval midgut9 ± 20 of 4 0.45Down
Larval tubule3 ± 10 of 4 0.20Down
Larval hindgut2 ± 10 of 4 0.13Down
Larval fat body20 ± 71 of 4 1.00None
Larval trachea3 ± 51 of 4 0.19Down
Larval carcass5 ± 20 of 4 0.25Down
S2 cells (growing)3 ± 00 of 4 0.17Down
Whole fly20 ± 14 of 4

Looking for FBgn0032271. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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