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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032280 through 18771 annotations produced 1 hits



(CG17105):

Annotation Number : CG17105
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032280
Gbrowse : chr2L:10681046-10681358 (+) // 100.0 //
Probeset : 1624964_at
Accessions : protein= NP_609434;, nucleotide= NM_135590;
FlyMine data for FBgn0032280.
VDRC has 2 RNAi stocks for FBgn0032280 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 10 of 4 0.70None
Head1 ± 00 of 4 0.40None
Eye9 ± 30 of 4 3.27None
Thoracicoabdominal ganglion2 ± 10 of 4 0.90None
Salivary gland14 ± 21 of 4 4.96Up
Crop2 ± 11 of 4 1.00None
Midgut4 ± 10 of 4 1.70None
Tubule2 ± 00 of 4 0.80None
Hindgut3 ± 10 of 4 1.10None
Heart0 ± 00 of 4 0.24None
Fat body3 ± 20 of 4 1.35None
Ovary6 ± 12 of 4 2.30None
Testis6 ± 10 of 4 2.10None
Male accessory glands4 ± 10 of 4 1.50None
Virgin spermatheca0 ± 00 of 4 0.30None
Mated spermatheca2 ± 10 of 4 0.73None
Adult carcass6 ± 30 of 4 2.20None
Larval CNS6 ± 42 of 4 2.18None
Larval Salivary gland6 ± 10 of 4 2.27None
Larval midgut2 ± 10 of 4 0.96None
Larval tubule4 ± 10 of 4 1.50None
Larval hindgut48 ± 144 of 417.02None
Larval fat body6 ± 40 of 4 2.30None
Larval trachea773 ± 5154 of 4273.81None
Larval carcass4093 ± 5164 of 41449.00Up
S2 cells (growing)3 ± 00 of 4 1.10None
Whole fly2 ± 00 of 4

Looking for FBgn0032280. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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