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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032281 through 18771 annotations produced 1 hits



(CG17107):

Annotation Number : CG17107
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032281
Gbrowse : chr2L:10681972-10682405 (+) // 100.0 //
Probeset : 1636330_at
Accessions : protein= NP_609435;, nucleotide= NM_135591;
FlyMine data for FBgn0032281.
BDGP gene expression has embryonic in situ data for CG17107: 4 pix of staining in 1 body parts.
BioGrid reports that CG17107 interacts with CG17347 CG17824 CG17928 CG2674 CG32223 CG3618 CG4254 CG5656 CG5785 CG6036 CG6703 CG7755 CG8170 CG9031 CG18284 CG31872 .
TRiP has 1 RNAi stocks for FBgn0032281 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032281 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.00Down
Head188 ± 274 of 4 3.20Up
Eye37 ± 34 of 4 0.65Down
Thoracicoabdominal ganglion3 ± 10 of 4 0.10Down
Salivary gland4 ± 20 of 4 0.08Down
Crop2 ± 10 of 4 0.00Down
Midgut1 ± 00 of 4 0.00Down
Tubule2 ± 00 of 4 0.00Down
Hindgut4 ± 10 of 4 0.10Down
Heart15 ± 41 of 4 0.27Down
Fat body12 ± 80 of 4 0.22Down
Ovary0 ± 00 of 4 0.00Down
Testis1 ± 00 of 4 0.00Down
Male accessory glands4 ± 20 of 4 0.10Down
Virgin spermatheca2 ± 00 of 4 0.04Down
Mated spermatheca1 ± 00 of 4 0.02Down
Adult carcass336 ± 184 of 4 5.80Up
Larval CNS0 ± 00 of 4 0.01Down
Larval Salivary gland1 ± 10 of 4 0.03Down
Larval midgut1 ± 00 of 4 0.03Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut337 ± 604 of 4 5.82Up
Larval fat body4 ± 30 of 4 0.10Down
Larval trachea123 ± 1903 of 4 2.13None
Larval carcass4133 ± 3794 of 471.27Up
S2 cells (growing)0 ± 00 of 4 0.01Down
Whole fly58 ± 64 of 4

Looking for FBgn0032281. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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