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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032292 through 18771 annotations produced 1 hits



(CG6750):

Annotation Number : CG6750
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032292
Gbrowse : chr2L:10731427-10732406 (-) // 100.0 //
Probeset : 1634883_at
Accessions : protein= NP_609444;, nucleotide= NM_135600;
FlyMine data for FBgn0032292.
TRiP has 1 RNAi stocks for FBgn0032292 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032292 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain228 ± 34 of 4 0.90Down
Head237 ± 74 of 4 0.90None
Eye331 ± 164 of 4 1.23Up
Thoracicoabdominal ganglion240 ± 44 of 4 0.90None
Salivary gland378 ± 104 of 4 1.41Up
Crop374 ± 24 of 4 1.40Up
Midgut261 ± 34 of 4 1.00None
Tubule157 ± 104 of 4 0.60Down
Hindgut279 ± 74 of 4 1.00None
Heart631 ± 504 of 4 2.35Up
Fat body516 ± 444 of 4 1.92Up
Ovary406 ± 64 of 4 1.50Up
Testis419 ± 54 of 4 1.60Up
Male accessory glands384 ± 154 of 4 1.40Up
Virgin spermatheca162 ± 64 of 4 0.61Down
Mated spermatheca178 ± 94 of 4 0.66Down
Adult carcass441 ± 194 of 4 1.60Up
Larval CNS232 ± 84 of 4 0.86None
Larval Salivary gland350 ± 114 of 4 1.30Up
Larval midgut203 ± 64 of 4 0.76Down
Larval tubule236 ± 14 of 4 0.90None
Larval hindgut261 ± 144 of 4 0.97None
Larval fat body230 ± 134 of 4 0.90None
Larval trachea230 ± 194 of 4 0.86None
Larval carcass221 ± 94 of 4 0.83Down
S2 cells (growing)488 ± 34 of 4 1.82Up
Whole fly268 ± 124 of 4

Looking for FBgn0032292. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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