FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032293 through 18771 annotations produced 1 hits

Dpy-30-like 1 (Dpy-30L1):

Annotation Number : CG6444
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032293
Gbrowse : chr2L:10732817-10733222 (+) // 100.0 //
Probeset : 1637776_at
Accessions : protein= NP_609445;, nucleotide= NM_135601;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0032293.
BioGrid reports that CG6444 interacts with CG7838 .
VDRC has 2 RNAi stocks for FBgn0032293 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	198 ± 9	4 of 4	1.70	Up
Head	101 ± 9	4 of 4	0.90	None
Eye	142 ± 7	4 of 4	1.23	Up
Thoracicoabdominal ganglion	153 ± 5	4 of 4	1.30	Up
Salivary gland	103 ± 3	4 of 4	0.90	None
Crop	102 ± 5	4 of 4	0.90	None
Midgut	75 ± 4	4 of 4	0.60	Down
Tubule	48 ± 1	4 of 4	0.40	Down
Hindgut	113 ± 3	4 of 4	1.00	None
Heart	57 ± 4	4 of 4	0.50	Down
Fat body	59 ± 4	4 of 4	0.51	Down
Ovary	189 ± 5	4 of 4	1.60	Up
Testis	113 ± 6	4 of 4	1.00	None
Male accessory glands	135 ± 0	4 of 4	1.20	Up
Virgin spermatheca	53 ± 2	4 of 4	0.46	Down
Mated spermatheca	52 ± 3	1 of 4	0.45	Down
Adult carcass	80 ± 7	4 of 4	0.70	Down
Larval CNS	218 ± 6	4 of 4	1.89	Up
Larval Salivary gland	151 ± 3	4 of 4	1.31	Up
Larval midgut	66 ± 3	4 of 4	0.58	Down
Larval tubule	96 ± 1	4 of 4	0.80	Down
Larval hindgut	127 ± 7	4 of 4	1.10	None
Larval fat body	82 ± 4	4 of 4	0.70	Down
Larval trachea	123 ± 12	4 of 4	1.07	None
Larval carcass	120 ± 3	4 of 4	1.04	None
S2 cells (growing)	142 ± 6	4 of 4	1.23	Up
Whole fly	115 ± 3	4 of 4

Looking for FBgn0032293. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720