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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032305 through 18771 annotations produced 1 hits



(CG6700):

Annotation Number : CG6700
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032305
Gbrowse : chr2L:10837728-10842603 (-) // 100.0 //
Probeset : 1627530_at
Accessions : protein= NP_001162944; /// NP_609459;, nucleotide= NM_001169473; /// NM_135615;
Interpro : 0016491 // oxidoreductase activity // inferred from electronic annotation
FlyMine data for FBgn0032305.
VDRC has 2 RNAi stocks for FBgn0032305 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain765 324 of 4 4.80Up
Head169 84 of 4 1.10None
Eye266 74 of 4 1.68Up
Thoracicoabdominal ganglion447 174 of 4 2.80Up
Salivary gland324 174 of 4 2.05Up
Crop222 124 of 4 1.40Up
Midgut210 84 of 4 1.30Up
Tubule152 34 of 4 1.00None
Hindgut252 84 of 4 1.60Up
Heart164 94 of 4 1.04None
Fat body234 224 of 4 1.48Up
Ovary304 34 of 4 1.90Up
Testis77 04 of 4 0.50Down
Male accessory glands420 214 of 4 2.70Up
Virgin spermatheca151 44 of 4 0.95None
Mated spermatheca164 74 of 4 1.04None
Adult carcass184 184 of 4 1.20None
Larval CNS438 384 of 4 2.77Up
Larval Salivary gland342 64 of 4 2.16Up
Larval midgut174 214 of 4 1.10None
Larval tubule235 144 of 4 1.50Up
Larval hindgut200 94 of 4 1.26Up
Larval fat body254 124 of 4 1.60Up
Larval trachea255 214 of 4 1.61Up
Larval carcass236 164 of 4 1.49Up
S2 cells (growing)346 74 of 4 2.18Up
Whole fly158 64 of 4

Looking for FBgn0032305. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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