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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032314 through 18771 annotations produced 1 hits



(CG7309):

Annotation Number : CG7309
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032314
Gbrowse : chr2L:10906269-10908743 (-) // 100.0 //
Probeset : 1623833_at
Accessions : protein= NP_609468;, nucleotide= NM_135624;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005310 // dicarboxylic acid transmembrane tr
FlyMine data for FBgn0032314.
TRiP has 1 RNAi stocks for FBgn0032314 available for purchase.
VDRC has 3 RNAi stocks for FBgn0032314 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 10 of 4 0.00Down
Head4 ± 01 of 4 0.00Down
Eye2 ± 00 of 4 0.02Down
Thoracicoabdominal ganglion3 ± 00 of 4 0.00Down
Salivary gland9 ± 21 of 4 0.10Down
Crop1 ± 00 of 4 0.00Down
Midgut4 ± 00 of 4 0.00Down
Tubule3 ± 00 of 4 0.00Down
Hindgut3 ± 11 of 4 0.00Down
Heart2 ± 00 of 4 0.02Down
Fat body5 ± 21 of 4 0.05Down
Ovary1 ± 00 of 4 0.00Down
Testis1291 ± 544 of 412.50Up
Male accessory glands7 ± 31 of 4 0.10Down
Virgin spermatheca6 ± 12 of 4 0.06Down
Mated spermatheca5 ± 11 of 4 0.05Down
Adult carcass6 ± 21 of 4 0.10Down
Larval CNS3 ± 11 of 4 0.03Down
Larval Salivary gland4 ± 12 of 4 0.05Down
Larval midgut4 ± 11 of 4 0.04Down
Larval tubule2 ± 00 of 4 0.00Down
Larval hindgut3 ± 00 of 4 0.03Down
Larval fat body129 ± 764 of 4 1.30None
Larval trachea5 ± 51 of 4 0.05Down
Larval carcass2 ± 00 of 4 0.03Down
S2 cells (growing)0 ± 00 of 4 0.01Down
Whole fly103 ± 74 of 4

Looking for FBgn0032314. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime