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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0032315 through 18771 annotations produced 1 hits


Annotation Number : CG14069
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032315
Gbrowse : chr2L:10910229-10910535 (-) // 100.0 //
Probeset : 1638705_at
Accessions : protein= NP_609469;, nucleotide= NM_135625;
FlyMine data for FBgn0032315.
VDRC has 2 RNAi stocks for FBgn0032315 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.80None
Head3 10 of 4 1.60None
Eye3 20 of 4 1.42None
Thoracicoabdominal ganglion2 10 of 4 1.30None
Salivary gland2 00 of 4 0.91None
Crop3 10 of 4 1.40None
Midgut1 00 of 4 0.80None
Tubule3 10 of 4 1.70None
Hindgut0 00 of 4 0.40None
Heart2 10 of 4 1.19None
Fat body3 20 of 4 1.44None
Ovary0 00 of 4 0.30None
Testis59 24 of 427.40Up
Male accessory glands4 20 of 4 2.00None
Virgin spermatheca0 00 of 4 0.30None
Mated spermatheca1 00 of 4 0.47None
Adult carcass1 00 of 4 0.50None
Larval CNS1 00 of 4 0.58None
Larval Salivary gland1 00 of 4 0.57None
Larval midgut5 10 of 4 2.34None
Larval tubule3 10 of 4 1.70None
Larval hindgut4 10 of 4 1.84None
Larval fat body1 00 of 4 0.60None
Larval trachea2 30 of 4 1.17None
Larval carcass3 20 of 4 1.47None
S2 cells (growing)1 00 of 4 0.55None
Whole fly2 00 of 4

Looking for FBgn0032315. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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