FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032331 through 18771 annotations produced 1 hits

/// GA13348 (CG14913 /// DpseGA13348):

Annotation Number : CG14913
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032331
Gbrowse : chr2L:11017171-11018359 (+) // 100.0 //
Probeset : 1635387_at
Accessions : protein= NP_001097146; /// NP_609480;, nucleotide= NM_001103676; /// NM_135636;
FlyMine data for FBgn0032331.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.90	None
Head	1 ± 0	0 of 4	1.10	None
Eye	0 ± 0	0 of 4	0.73	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	1.00	None
Salivary gland	2 ± 0	0 of 4	2.83	Up
Crop	2 ± 1	0 of 4	2.50	None
Midgut	1 ± 0	0 of 4	1.40	None
Tubule	1 ± 0	0 of 4	1.60	Up
Hindgut	1 ± 0	0 of 4	1.40	None
Heart	1 ± 0	0 of 4	1.34	None
Fat body	2 ± 0	0 of 4	2.32	Up
Ovary	0 ± 0	0 of 4	0.50	None
Testis	3 ± 0	0 of 4	3.10	None
Male accessory glands	162 ± 7	4 of 4	158.20	Up
Virgin spermatheca	4 ± 2	0 of 4	4.44	None
Mated spermatheca	2 ± 0	0 of 4	2.15	Up
Adult carcass	1 ± 0	0 of 4	1.40	None
Larval CNS	1 ± 1	0 of 4	1.80	None
Larval Salivary gland	1 ± 0	0 of 4	1.32	None
Larval midgut	1 ± 0	0 of 4	1.29	None
Larval tubule	1 ± 0	0 of 4	1.40	None
Larval hindgut	1 ± 0	0 of 4	1.17	None
Larval fat body	2 ± 0	0 of 4	2.10	Up
Larval trachea	2 ± 3	0 of 4	2.73	None
Larval carcass	1 ± 0	0 of 4	1.41	None
S2 cells (growing)	0 ± 0	0 of 4	0.88	None
Whole fly	1 ± 0	0 of 4

Looking for FBgn0032331. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720