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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032345 through 18771 annotations produced 1 hits



(CG14921):

Annotation Number : CG14921
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032345
Gbrowse : chr2L:11120640-11121683 (-) // 100.0 //
Probeset : 1638032_at
Accessions : protein= NP_609491;, nucleotide= NM_135647;
FlyMine data for FBgn0032345.
BDGP gene expression has embryonic in situ data for CG14921: 18 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0032345 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 00 of 4 0.20Down
Head5 ± 20 of 4 0.20Down
Eye6 ± 12 of 4 0.21Down
Thoracicoabdominal ganglion6 ± 11 of 4 0.20Down
Salivary gland18 ± 60 of 4 0.57None
Crop6 ± 10 of 4 0.20Down
Midgut6 ± 20 of 4 0.20Down
Tubule6 ± 10 of 4 0.20Down
Hindgut8 ± 11 of 4 0.20Down
Heart5 ± 02 of 4 0.17Down
Fat body11 ± 40 of 4 0.34Down
Ovary6 ± 00 of 4 0.20Down
Testis293 ± 54 of 4 8.90Up
Male accessory glands6 ± 20 of 4 0.20Down
Virgin spermatheca7 ± 10 of 4 0.23Down
Mated spermatheca10 ± 10 of 4 0.31Down
Adult carcass7 ± 20 of 4 0.20Down
Larval CNS8 ± 11 of 4 0.25Down
Larval Salivary gland12 ± 10 of 4 0.37Down
Larval midgut13 ± 00 of 4 0.41Down
Larval tubule2 ± 00 of 4 0.10Down
Larval hindgut14 ± 02 of 4 0.43Down
Larval fat body48 ± 143 of 4 1.50None
Larval trachea8 ± 03 of 4 0.25Down
Larval carcass13 ± 23 of 4 0.41Down
S2 cells (growing)7 ± 10 of 4 0.24Down
Whole fly33 ± 14 of 4

Looking for FBgn0032345. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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