FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032346 through 18771 annotations produced 1 hits

Csl4 (Csl4):

Annotation Number : CG6249
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032346
Gbrowse : chr2L:11122563-11123792 (-) // 100.0 //
Probeset : 1639219_at
Accessions : protein= NP_609492;, nucleotide= NM_135648;
Pathway : 0000176 // nuclear exosome (RNase complex) // inferred from physical interaction /// 0000176 // nuclear exosome (RNase c
Interpro : 0000175 // 3'-5'-exoribonuclease activity // inferred from sequence or structural similarity /// 0005515 // protein bind
FlyMine data for FBgn0032346.
BioGrid reports that CG6249 interacts with CG8025 .
VDRC has 1 RNAi stocks for FBgn0032346 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	69 ± 2	4 of 4	0.60	Down
Head	47 ± 2	4 of 4	0.40	Down
Eye	29 ± 0	4 of 4	0.24	Down
Thoracicoabdominal ganglion	84 ± 1	4 of 4	0.70	Down
Salivary gland	38 ± 4	4 of 4	0.32	Down
Crop	48 ± 3	4 of 4	0.40	Down
Midgut	37 ± 3	4 of 4	0.30	Down
Tubule	51 ± 6	4 of 4	0.40	Down
Hindgut	37 ± 3	4 of 4	0.30	Down
Heart	34 ± 2	4 of 4	0.28	Down
Fat body	47 ± 10	4 of 4	0.39	Down
Ovary	243 ± 1	4 of 4	2.00	Up
Testis	56 ± 0	4 of 4	0.50	Down
Male accessory glands	119 ± 7	4 of 4	1.00	None
Virgin spermatheca	58 ± 1	4 of 4	0.48	Down
Mated spermatheca	86 ± 1	4 of 4	0.71	Down
Adult carcass	33 ± 3	4 of 4	0.30	Down
Larval CNS	138 ± 7	4 of 4	1.14	None
Larval Salivary gland	72 ± 7	4 of 4	0.60	Down
Larval midgut	32 ± 0	4 of 4	0.26	Down
Larval tubule	16 ± 1	4 of 4	0.10	Down
Larval hindgut	51 ± 6	4 of 4	0.42	Down
Larval fat body	24 ± 3	4 of 4	0.20	Down
Larval trachea	75 ± 6	4 of 4	0.62	Down
Larval carcass	53 ± 13	4 of 4	0.45	Down
S2 cells (growing)	85 ± 1	4 of 4	0.71	Down
Whole fly	121 ± 7	4 of 4

Looking for FBgn0032346. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720