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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032348 through 18771 annotations produced 1 hits



(CG4751):

Annotation Number : CG4751
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032348
Gbrowse : chr2L:11130740-11136003 (+) // 100.0 //
Probeset : 1626898_at
Accessions : protein= NP_609495;, nucleotide= NM_135651;
Interpro : 0008233 // peptidase activity // inferred from electronic annotation /// 0016787 // hydrolase activity // inferred from
FlyMine data for FBgn0032348.
BioGrid reports that CG4751 interacts with CG9986 .
VDRC has 2 RNAi stocks for FBgn0032348 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain338 74 of 4 2.70Up
Head122 44 of 4 1.00None
Eye122 44 of 4 0.98None
Thoracicoabdominal ganglion336 104 of 4 2.70Up
Salivary gland208 94 of 4 1.68Up
Crop132 24 of 4 1.10None
Midgut93 54 of 4 0.80Down
Tubule116 54 of 4 0.90None
Hindgut109 24 of 4 0.90Down
Heart76 34 of 4 0.62Down
Fat body45 54 of 4 0.37Down
Ovary270 34 of 4 2.20Up
Testis62 34 of 4 0.50Down
Male accessory glands137 64 of 4 1.10None
Virgin spermatheca123 24 of 4 1.00None
Mated spermatheca134 84 of 4 1.08None
Adult carcass75 14 of 4 0.60Down
Larval CNS517 264 of 4 4.16Up
Larval Salivary gland266 24 of 4 2.14Up
Larval midgut85 54 of 4 0.68Down
Larval tubule160 24 of 4 1.30Up
Larval hindgut141 34 of 4 1.14Up
Larval fat body85 84 of 4 0.70Down
Larval trachea216 164 of 4 1.74Up
Larval carcass164 54 of 4 1.32Up
S2 cells (growing)233 34 of 4 1.87Up
Whole fly124 24 of 4

Looking for FBgn0032348. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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