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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032362 through 18771 annotations produced 1 hits



CG14928 (spz4):

Annotation Number : CG14928
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032362
Gbrowse : chr2L:11505883-11507897 (+) // 100.0 //
Probeset : 1629554_at
Accessions : protein= NP_609504;, nucleotide= NM_135660;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0032362.
BioGrid reports that CG14928 interacts with CG3415 CG30077 CG3294 CG6856 CG7399 .
VDRC has 1 RNAi stocks for FBgn0032362 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 10 of 4 0.60None
Head2 ± 00 of 4 0.30None
Eye2 ± 00 of 4 0.32None
Thoracicoabdominal ganglion9 ± 20 of 4 1.10None
Salivary gland9 ± 40 of 4 1.13None
Crop29 ± 10 of 4 3.60Up
Midgut4 ± 00 of 4 0.60None
Tubule7 ± 00 of 4 0.90None
Hindgut11 ± 20 of 4 1.40None
Heart2 ± 00 of 4 0.27None
Fat body3 ± 10 of 4 0.36None
Ovary5 ± 10 of 4 0.60None
Testis1 ± 00 of 4 0.20None
Male accessory glands4 ± 10 of 4 0.50None
Virgin spermatheca2 ± 00 of 4 0.29None
Mated spermatheca1 ± 00 of 4 0.21None
Adult carcass6 ± 10 of 4 0.70None
Larval CNS3 ± 10 of 4 0.45None
Larval Salivary gland8 ± 10 of 4 0.96None
Larval midgut3 ± 00 of 4 0.46None
Larval tubule2 ± 00 of 4 0.30None
Larval hindgut12 ± 11 of 4 1.47None
Larval fat body3 ± 10 of 4 0.40None
Larval trachea3 ± 40 of 4 0.40None
Larval carcass5 ± 10 of 4 0.63None
S2 cells (growing)6 ± 10 of 4 0.75None
Whole fly8 ± 40 of 4

Looking for FBgn0032362. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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