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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032364 through 18771 annotations produced 1 hits



/// (CG14929 /// CG4970):

Annotation Number : CG32953
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032364 /// FBgn0032365
Gbrowse : chr2L:11518453-11521446 (+) // 100.0 //
Probeset : 1641690_a_at
Accessions : protein= NP_001027253; /// NP_609506; /// NP_609507;, nucleotide= NM_001032082; /// NM_135662; /// NM_135663;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0032364 /// FBgn0032365.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.30None
Head1 ± 00 of 4 0.40None
Eye1 ± 10 of 4 0.45None
Thoracicoabdominal ganglion2 ± 00 of 4 0.60None
Salivary gland9 ± 41 of 4 2.97None
Crop1 ± 00 of 4 0.40None
Midgut0 ± 00 of 4 0.20None
Tubule1 ± 00 of 4 0.40Down
Hindgut2 ± 10 of 4 0.60None
Heart1 ± 00 of 4 0.42None
Fat body2 ± 20 of 4 0.75None
Ovary0 ± 00 of 4 0.30None
Testis46 ± 14 of 415.10Up
Male accessory glands0 ± 00 of 4 0.30None
Virgin spermatheca1 ± 00 of 4 0.52None
Mated spermatheca2 ± 10 of 4 0.90None
Adult carcass9 ± 31 of 4 2.90None
Larval CNS0 ± 00 of 4 0.12None
Larval Salivary gland4 ± 11 of 4 1.36None
Larval midgut1 ± 10 of 4 0.61None
Larval tubule3 ± 10 of 4 1.00None
Larval hindgut0 ± 00 of 4 0.18None
Larval fat body6 ± 10 of 4 2.00None
Larval trachea2 ± 11 of 4 0.88None
Larval carcass1 ± 00 of 4 0.45None
S2 cells (growing)2 ± 00 of 4 0.66None
Whole fly3 ± 10 of 4

Looking for FBgn0032364. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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