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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032366 through 18771 annotations produced 1 hits



(CG14930):

Annotation Number : CG14930
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032366
Gbrowse : chr2L:11520357-11521285 (-) // 100.0 //
Probeset : 1633761_at
Accessions : protein= NP_609508;, nucleotide= NM_135664;
Interpro : 0003677 // DNA binding // inferred from electronic annotation
FlyMine data for FBgn0032366.
BDGP gene expression has embryonic in situ data for CG14930: 2 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0032366 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.10Down
Head3 10 of 4 0.20Down
Eye2 10 of 4 0.17Down
Thoracicoabdominal ganglion1 00 of 4 0.10Down
Salivary gland3 10 of 4 0.24Down
Crop2 00 of 4 0.10Down
Midgut0 00 of 4 0.10Down
Tubule0 00 of 4 0.10Down
Hindgut1 00 of 4 0.10Down
Heart2 00 of 4 0.17Down
Fat body9 20 of 4 0.62Down
Ovary1 00 of 4 0.10Down
Testis216 124 of 413.70Up
Male accessory glands1 00 of 4 0.10Down
Virgin spermatheca3 10 of 4 0.19Down
Mated spermatheca2 00 of 4 0.12Down
Adult carcass5 21 of 4 0.40Down
Larval CNS1 00 of 4 0.07Down
Larval Salivary gland2 10 of 4 0.13Down
Larval midgut1 00 of 4 0.11Down
Larval tubule1 00 of 4 0.10Down
Larval hindgut5 00 of 4 0.33Down
Larval fat body60 164 of 4 3.80None
Larval trachea4 30 of 4 0.28Down
Larval carcass3 10 of 4 0.23Down
S2 cells (growing)2 10 of 4 0.14Down
Whole fly15 14 of 4

Looking for FBgn0032366. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime