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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032374 through 18771 annotations produced 1 hits



(CG14931):

Annotation Number : CG14931
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032374
Gbrowse : chr2L:11788675-11789331 (+) // 100.0 //
Probeset : 1630140_at
Accessions : protein= NP_609516;, nucleotide= NM_135672;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0032374.
BioGrid reports that CG14931 interacts with CG15631 .
TRiP has 1 RNAi stocks for FBgn0032374 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032374 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 10 of 4 0.00Down
Head5 ± 10 of 4 0.00Down
Eye3 ± 00 of 4 0.02Down
Thoracicoabdominal ganglion2 ± 10 of 4 0.00Down
Salivary gland12 ± 50 of 4 0.07Down
Crop4 ± 00 of 4 0.00Down
Midgut10 ± 21 of 4 0.10Down
Tubule5 ± 20 of 4 0.00Down
Hindgut6 ± 10 of 4 0.00Down
Heart3 ± 10 of 4 0.02Down
Fat body6 ± 20 of 4 0.03Down
Ovary433 ± 64 of 4 2.30Up
Testis212 ± 164 of 4 1.10None
Male accessory glands3 ± 10 of 4 0.00Down
Virgin spermatheca5 ± 20 of 4 0.03Down
Mated spermatheca4 ± 10 of 4 0.02Down
Adult carcass10 ± 21 of 4 0.10Down
Larval CNS1 ± 10 of 4 0.01Down
Larval Salivary gland1 ± 00 of 4 0.01Down
Larval midgut10 ± 11 of 4 0.05Down
Larval tubule3 ± 10 of 4 0.00Down
Larval hindgut4 ± 10 of 4 0.02Down
Larval fat body54 ± 203 of 4 0.30Down
Larval trachea6 ± 20 of 4 0.03Down
Larval carcass6 ± 10 of 4 0.03Down
S2 cells (growing)5 ± 00 of 4 0.03Down
Whole fly189 ± 74 of 4

Looking for FBgn0032374. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime