FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032377 through 18771 annotations produced 1 hits

(CG14937):

Annotation Number : CG14937
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032377
Gbrowse : chr2L:11792401-11794083 (-) // 100.0 //
Probeset : 1625749_at
Accessions : protein= NP_609518;, nucleotide= NM_135674;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0032377.
BDGP gene expression has embryonic in situ data for CG14937: 26 pix of staining in 15 body parts.
BioGrid reports that CG14937 interacts with CG16983 .
TRiP has 1 RNAi stocks for FBgn0032377 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032377 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	21 ± 2	4 of 4	2.90	Up
Head	6 ± 1	3 of 4	0.90	None
Eye	7 ± 1	1 of 4	0.97	None
Thoracicoabdominal ganglion	21 ± 1	4 of 4	2.80	Up
Salivary gland	17 ± 2	2 of 4	2.29	Up
Crop	8 ± 0	4 of 4	1.20	None
Midgut	9 ± 1	3 of 4	1.30	None
Tubule	16 ± 1	3 of 4	2.20	Up
Hindgut	9 ± 1	3 of 4	1.30	None
Heart	4 ± 1	1 of 4	0.63	None
Fat body	10 ± 2	2 of 4	1.41	None
Ovary	4 ± 0	2 of 4	0.60	None
Testis	17 ± 1	4 of 4	2.40	Up
Male accessory glands	9 ± 2	2 of 4	1.30	None
Virgin spermatheca	12 ± 2	3 of 4	1.66	None
Mated spermatheca	10 ± 0	3 of 4	1.38	None
Adult carcass	14 ± 2	2 of 4	2.00	None
Larval CNS	38 ± 8	4 of 4	5.14	Up
Larval Salivary gland	9 ± 0	3 of 4	1.33	None
Larval midgut	7 ± 1	1 of 4	0.95	None
Larval tubule	11 ± 0	4 of 4	1.50	Up
Larval hindgut	4 ± 0	3 of 4	0.59	None
Larval fat body	8 ± 1	1 of 4	1.20	None
Larval trachea	4 ± 1	2 of 4	0.65	None
Larval carcass	6 ± 1	1 of 4	0.87	None
S2 cells (growing)	11 ± 0	4 of 4	1.56	Up
Whole fly	7 ± 1	3 of 4

Looking for FBgn0032377. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720