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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032382 through 18771 annotations produced 1 hits



/// (CG14935 /// DsecCG14935):

Annotation Number : CG14935
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032382
Gbrowse : chr2L:11849961-11852569 (+) // 100.0 //
Probeset : 1623900_a_at
Accessions : protein= NP_609523; /// NP_723693;, nucleotide= NM_135679; /// NM_164975;
Interpro : "0003824 // catalytic activity // inferred from electronic annotation /// 0004558 // alpha-glucosidase activity // infer
FlyMine data for FBgn0032382.
BDGP gene expression has embryonic in situ data for CG14935: 4 pix of staining in 1 body parts.
Homophila reports that CG14935 is a close match (9e-99) to human gene ATR1;D2H;NBAT;SLC3A1 (NP_000332), a gene associated with Cystinuria, 220100 (3);Homozygous 2p16 deletion syndrome, 606407 (3).
BioGrid reports that CG14935 interacts with CG17109 .
VDRC has 1 RNAi stocks for FBgn0032382 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain51 ± 34 of 4 0.20Down
Head706 ± 404 of 4 2.90Up
Eye186 ± 454 of 4 0.76None
Thoracicoabdominal ganglion67 ± 14 of 4 0.30Down
Salivary gland46 ± 24 of 4 0.19Down
Crop57 ± 94 of 4 0.20Down
Midgut22 ± 14 of 4 0.10Down
Tubule220 ± 274 of 4 0.90None
Hindgut176 ± 54 of 4 0.70None
Heart726 ± 674 of 4 2.97Up
Fat body1922 ± 974 of 4 7.88Up
Ovary94 ± 54 of 4 0.40Down
Testis11 ± 04 of 4 0.00Down
Male accessory glands45 ± 84 of 4 0.20Down
Virgin spermatheca1534 ± 284 of 4 6.28Up
Mated spermatheca1043 ± 674 of 4 4.28Up
Adult carcass1024 ± 524 of 4 4.20Up
Larval CNS39 ± 34 of 4 0.16Down
Larval Salivary gland50 ± 14 of 4 0.21Down
Larval midgut16 ± 21 of 4 0.07Down
Larval tubule303 ± 64 of 4 1.20None
Larval hindgut66 ± 24 of 4 0.27Down
Larval fat body786 ± 954 of 4 3.20Up
Larval trachea33 ± 64 of 4 0.14Down
Larval carcass286 ± 294 of 4 1.17None
S2 cells (growing)100 ± 44 of 4 0.41Down
Whole fly244 ± 434 of 4

Looking for FBgn0032382. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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