FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032398 through 18771 annotations produced 1 hits

(CG6766):

Annotation Number : CG6766
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032398
Gbrowse : chr2L:12038612-12040682 (-) // 100.0 //
Probeset : 1631745_at
Accessions : protein= NP_609537;, nucleotide= NM_135693;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0032398.
BDGP gene expression has embryonic in situ data for CG6766: 9 pix of staining in 15 body parts.
VDRC has 1 RNAi stocks for FBgn0032398 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	418 ± 11	4 of 4	1.40	Up
Head	427 ± 10	4 of 4	1.40	Up
Eye	758 ± 23	4 of 4	2.53	Up
Thoracicoabdominal ganglion	541 ± 24	4 of 4	1.80	Up
Salivary gland	1343 ± 32	4 of 4	4.49	Up
Crop	289 ± 12	4 of 4	1.00	None
Midgut	463 ± 12	4 of 4	1.50	Up
Tubule	560 ± 15	4 of 4	1.90	Up
Hindgut	320 ± 4	4 of 4	1.10	None
Heart	386 ± 21	4 of 4	1.29	Up
Fat body	428 ± 30	4 of 4	1.43	Up
Ovary	347 ± 6	4 of 4	1.20	Up
Testis	240 ± 2	4 of 4	0.80	Down
Male accessory glands	974 ± 38	4 of 4	3.30	Up
Virgin spermatheca	823 ± 35	4 of 4	2.75	Up
Mated spermatheca	795 ± 58	4 of 4	2.66	Up
Adult carcass	315 ± 9	4 of 4	1.10	None
Larval CNS	281 ± 4	4 of 4	0.94	None
Larval Salivary gland	1131 ± 33	4 of 4	3.78	Up
Larval midgut	474 ± 17	4 of 4	1.59	Up
Larval tubule	451 ± 7	4 of 4	1.50	Up
Larval hindgut	268 ± 6	4 of 4	0.90	None
Larval fat body	319 ± 9	4 of 4	1.10	None
Larval trachea	266 ± 23	4 of 4	0.89	None
Larval carcass	259 ± 17	4 of 4	0.87	None
S2 cells (growing)	571 ± 3	4 of 4	1.91	Up
Whole fly	299 ± 13	4 of 4

Looking for FBgn0032398. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720