Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032399 through 18771 annotations produced 1 hits



(CG6785):

Annotation Number : CG6785
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032399
Gbrowse : chr2L:12041048-12045200 (-) // 100.0 //
Probeset : 1635731_at
Accessions : protein= NP_609538;, nucleotide= NM_135694;
FlyMine data for FBgn0032399.
VDRC has 3 RNAi stocks for FBgn0032399 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain9 ± 04 of 4 0.80None
Head13 ± 13 of 4 1.10None
Eye5 ± 11 of 4 0.51None
Thoracicoabdominal ganglion13 ± 10 of 4 1.20None
Salivary gland79 ± 104 of 4 6.73Up
Crop10 ± 00 of 4 0.90None
Midgut8 ± 00 of 4 0.70None
Tubule5 ± 00 of 4 0.50Down
Hindgut13 ± 13 of 4 1.10None
Heart10 ± 23 of 4 0.86None
Fat body20 ± 13 of 4 1.76Up
Ovary12 ± 04 of 4 1.00None
Testis51 ± 24 of 4 4.30Up
Male accessory glands89 ± 94 of 4 7.60Up
Virgin spermatheca23 ± 24 of 4 1.99Up
Mated spermatheca16 ± 00 of 4 1.42None
Adult carcass20 ± 22 of 4 1.70Up
Larval CNS8 ± 14 of 4 0.73None
Larval Salivary gland55 ± 64 of 4 4.67Up
Larval midgut13 ± 31 of 4 1.18None
Larval tubule7 ± 02 of 4 0.70None
Larval hindgut39 ± 74 of 4 3.31Up
Larval fat body15 ± 31 of 4 1.30None
Larval trachea9 ± 24 of 4 0.77None
Larval carcass7 ± 21 of 4 0.66None
S2 cells (growing)8 ± 10 of 4 0.75None
Whole fly11 ± 13 of 4

Looking for FBgn0032399. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime