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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032414 through 18771 annotations produced 1 hits



(CG17211):

Annotation Number : CG17211
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032414
Gbrowse : chr2L:12125097-12129629 (+) // 100.0 //
Probeset : 1628689_at
Accessions : protein= NP_609552;, nucleotide= NM_135708;
FlyMine data for FBgn0032414.
BioGrid reports that CG17211 interacts with CG3474 CG8092 CG8247 .
VDRC has 1 RNAi stocks for FBgn0032414 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.40None
Head42 ± 54 of 4 8.60Up
Eye173 ± 94 of 435.16Up
Thoracicoabdominal ganglion2 ± 10 of 4 0.60None
Salivary gland13 ± 20 of 4 2.68Up
Crop4 ± 10 of 4 1.00None
Midgut1 ± 00 of 4 0.30None
Tubule2 ± 00 of 4 0.60Down
Hindgut2 ± 00 of 4 0.40None
Heart2 ± 00 of 4 0.56None
Fat body1 ± 00 of 4 0.38None
Ovary1 ± 10 of 4 0.40None
Testis4 ± 10 of 4 0.80None
Male accessory glands8 ± 20 of 4 1.70None
Virgin spermatheca1 ± 00 of 4 0.20None
Mated spermatheca1 ± 00 of 4 0.28None
Adult carcass3 ± 20 of 4 0.70None
Larval CNS62 ± 34 of 412.61Up
Larval Salivary gland9 ± 40 of 4 2.02None
Larval midgut4 ± 10 of 4 0.90None
Larval tubule3 ± 00 of 4 0.70None
Larval hindgut0 ± 00 of 4 0.18None
Larval fat body0 ± 00 of 4 0.20None
Larval trachea28 ± 23 of 4 5.77Up
Larval carcass11 ± 10 of 4 2.33Up
S2 cells (growing)1 ± 00 of 4 0.38None
Whole fly4 ± 10 of 4

Looking for FBgn0032414. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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