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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032416 through 18771 annotations produced 1 hits



Gustatory receptor 33a (Gr33a):

Annotation Number : CG17213
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032416
Gbrowse : chr2L:12138072-12140251 (+) // 100.0 //
Probeset : 1640575_at
Accessions : protein= NP_525102;, nucleotide= NM_080363;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0032416.
VDRC has 3 RNAi stocks for FBgn0032416 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.40None
Head6 ± 11 of 4 1.20None
Eye1 ± 00 of 4 0.30None
Thoracicoabdominal ganglion1 ± 00 of 4 0.30None
Salivary gland10 ± 40 of 4 1.91None
Crop5 ± 10 of 4 1.00None
Midgut1 ± 00 of 4 0.20None
Tubule2 ± 00 of 4 0.50Down
Hindgut4 ± 21 of 4 0.90None
Heart1 ± 00 of 4 0.35None
Fat body3 ± 10 of 4 0.62None
Ovary1 ± 00 of 4 0.20None
Testis10 ± 14 of 4 1.90None
Male accessory glands4 ± 10 of 4 0.80None
Virgin spermatheca1 ± 00 of 4 0.31None
Mated spermatheca1 ± 00 of 4 0.23None
Adult carcass6 ± 10 of 4 1.20None
Larval CNS2 ± 00 of 4 0.46None
Larval Salivary gland2 ± 00 of 4 0.41None
Larval midgut1 ± 00 of 4 0.22None
Larval tubule6 ± 31 of 4 1.20None
Larval hindgut0 ± 00 of 4 0.13None
Larval fat body5 ± 20 of 4 1.10None
Larval trachea0 ± 00 of 4 0.11None
Larval carcass1 ± 00 of 4 0.28None
S2 cells (growing)1 ± 00 of 4 0.33None
Whole fly5 ± 10 of 4

Looking for FBgn0032416. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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