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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032437 through 18771 annotations produced 1 hits



(CG17024):

Annotation Number : CG17024
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032437
Gbrowse : chr2L:12453681-12454951 (+) // 100.0 //
Probeset : 1624038_at
Accessions : protein= NP_609572;, nucleotide= NM_135728;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004638 // phosphoribosylaminoimidazole carboxy
FlyMine data for FBgn0032437.
BioGrid reports that CG17024 interacts with CG9610 .
VDRC has 3 RNAi stocks for FBgn0032437 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.80None
Head1 ± 00 of 4 2.50None
Eye0 ± 00 of 4 1.29None
Thoracicoabdominal ganglion0 ± 00 of 4 1.10None
Salivary gland2 ± 10 of 4 5.65None
Crop0 ± 00 of 4 1.90None
Midgut15 ± 52 of 437.10None
Tubule1 ± 00 of 4 3.20Up
Hindgut1 ± 00 of 4 3.10None
Heart2 ± 10 of 4 5.47None
Fat body2 ± 30 of 4 6.18None
Ovary0 ± 00 of 4 0.90None
Testis0 ± 00 of 4 1.00None
Male accessory glands0 ± 00 of 4 2.10None
Virgin spermatheca0 ± 00 of 4 1.94None
Mated spermatheca0 ± 00 of 4 1.35None
Adult carcass0 ± 00 of 4 1.60None
Larval CNS0 ± 00 of 4 1.00None
Larval Salivary gland1 ± 00 of 4 2.47None
Larval midgut4 ± 10 of 411.53None
Larval tubule0 ± 00 of 4 1.90None
Larval hindgut0 ± 00 of 4 0.76None
Larval fat body1 ± 00 of 4 3.20None
Larval trachea0 ± 00 of 4 0.47None
Larval carcass0 ± 00 of 4 1.06None
S2 cells (growing)0 ± 00 of 4 0.76None
Whole fly0 ± 00 of 4

Looking for FBgn0032437. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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