FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032439 through 18771 annotations produced 1 hits

ref2 (ref2):

Annotation Number : CG17031
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032439
Gbrowse : chr2L:12610718-12611381 (-) // 100.0 //
Probeset : 1627437_at
Accessions : protein= NP_609574;, nucleotide= NM_135730;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0032439.
VDRC has 2 RNAi stocks for FBgn0032439 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.20	Down
Head	4 ± 1	0 of 4	0.30	Down
Eye	2 ± 1	0 of 4	0.21	Down
Thoracicoabdominal ganglion	3 ± 0	0 of 4	0.30	Down
Salivary gland	7 ± 2	0 of 4	0.53	None
Crop	5 ± 1	0 of 4	0.40	Down
Midgut	7 ± 2	0 of 4	0.50	None
Tubule	5 ± 0	0 of 4	0.40	Down
Hindgut	3 ± 1	0 of 4	0.30	Down
Heart	2 ± 1	0 of 4	0.18	Down
Fat body	6 ± 3	0 of 4	0.45	Down
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	202 ± 6	4 of 4	14.80	Up
Male accessory glands	4 ± 1	0 of 4	0.40	Down
Virgin spermatheca	4 ± 1	1 of 4	0.36	Down
Mated spermatheca	4 ± 2	0 of 4	0.31	Down
Adult carcass	11 ± 1	0 of 4	0.80	None
Larval CNS	2 ± 2	0 of 4	0.16	Down
Larval Salivary gland	3 ± 2	1 of 4	0.28	Down
Larval midgut	6 ± 1	0 of 4	0.46	Down
Larval tubule	5 ± 0	0 of 4	0.40	Down
Larval hindgut	3 ± 0	0 of 4	0.24	Down
Larval fat body	53 ± 22	3 of 4	3.90	None
Larval trachea	3 ± 2	0 of 4	0.26	Down
Larval carcass	6 ± 0	0 of 4	0.44	Down
S2 cells (growing)	1 ± 0	0 of 4	0.07	Down
Whole fly	13 ± 1	4 of 4

Looking for FBgn0032439. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720