FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032445 through 18771 annotations produced 1 hits

(CG6153):

Annotation Number : CG6153
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032445
Gbrowse : chr2L:12693022-12693892 (+) // 100.0 //
Probeset : 1641465_at
Accessions : protein= NP_001162966; /// NP_609580;, nucleotide= NM_001169495; /// NM_135736;
FlyMine data for FBgn0032445.
BDGP gene expression has embryonic in situ data for CG6153: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0032445 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	86 ± 3	4 of 4	0.60	Down
Head	86 ± 2	4 of 4	0.60	Down
Eye	109 ± 5	4 of 4	0.79	Down
Thoracicoabdominal ganglion	84 ± 3	4 of 4	0.60	Down
Salivary gland	93 ± 3	4 of 4	0.67	Down
Crop	137 ± 0	4 of 4	1.00	None
Midgut	83 ± 1	4 of 4	0.60	Down
Tubule	73 ± 2	4 of 4	0.50	Down
Hindgut	86 ± 2	4 of 4	0.60	Down
Heart	184 ± 4	4 of 4	1.33	Up
Fat body	167 ± 15	4 of 4	1.20	Up
Ovary	244 ± 7	4 of 4	1.80	Up
Testis	371 ± 17	4 of 4	2.70	Up
Male accessory glands	102 ± 6	4 of 4	0.70	Down
Virgin spermatheca	69 ± 3	4 of 4	0.50	Down
Mated spermatheca	86 ± 5	4 of 4	0.62	Down
Adult carcass	104 ± 3	4 of 4	0.80	Down
Larval CNS	136 ± 8	4 of 4	0.98	None
Larval Salivary gland	123 ± 5	4 of 4	0.88	None
Larval midgut	91 ± 6	4 of 4	0.65	Down
Larval tubule	136 ± 3	4 of 4	1.00	None
Larval hindgut	132 ± 6	4 of 4	0.95	None
Larval fat body	115 ± 11	4 of 4	0.80	None
Larval trachea	149 ± 10	4 of 4	1.07	None
Larval carcass	158 ± 11	4 of 4	1.14	None
S2 cells (growing)	121 ± 2	4 of 4	0.87	None
Whole fly	139 ± 7	4 of 4

Looking for FBgn0032445. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720