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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032489 through 18771 annotations produced 1 hits



(CG15480):

Annotation Number : CG15480
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032489
Gbrowse : chr2L:13224705-13225206 (-) // 100.0 //
Probeset : 1631065_at
Accessions : protein= NP_609620;, nucleotide= NM_135776;
FlyMine data for FBgn0032489.
VDRC has 1 RNAi stocks for FBgn0032489 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 10 of 4 0.70None
Head8 ± 10 of 4 0.80None
Eye6 ± 00 of 4 0.64None
Thoracicoabdominal ganglion6 ± 10 of 4 0.60None
Salivary gland36 ± 30 of 4 3.50Up
Crop12 ± 20 of 4 1.20None
Midgut10 ± 20 of 4 1.00None
Tubule8 ± 10 of 4 0.80None
Hindgut6 ± 30 of 4 0.60None
Heart4 ± 20 of 4 0.47None
Fat body18 ± 30 of 4 1.73None
Ovary7 ± 00 of 4 0.70None
Testis7 ± 10 of 4 0.70None
Male accessory glands7 ± 20 of 4 0.70None
Virgin spermatheca11 ± 10 of 4 1.07None
Mated spermatheca13 ± 10 of 4 1.30None
Adult carcass21 ± 40 of 4 2.00None
Larval CNS10 ± 40 of 4 1.02None
Larval Salivary gland22 ± 40 of 4 2.13None
Larval midgut18 ± 20 of 4 1.79Up
Larval tubule9 ± 10 of 4 0.90None
Larval hindgut12 ± 20 of 4 1.21None
Larval fat body11 ± 30 of 4 1.10None
Larval trachea5 ± 40 of 4 0.50None
Larval carcass19 ± 10 of 4 1.88Up
S2 cells (growing)13 ± 00 of 4 1.26None
Whole fly10 ± 21 of 4

Looking for FBgn0032489. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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