FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032522 through 18771 annotations produced 1 hits

(CG16848):

Annotation Number : CG16848
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032522
Gbrowse : chr2L:13412518-13413718 (+) // 100.0 //
Probeset : 1633194_at
Accessions : protein= NP_609653;, nucleotide= NM_135809;
Interpro : 0003919 // FMN adenylyltransferase activity // inferred from sequence or structural similarity /// 0003919 // FMN adenyl
FlyMine data for FBgn0032522.
VDRC has 2 RNAi stocks for FBgn0032522 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.10	Down
Head	1 ± 0	0 of 4	0.10	Down
Eye	3 ± 1	0 of 4	0.19	Down
Thoracicoabdominal ganglion	2 ± 0	0 of 4	0.10	Down
Salivary gland	11 ± 1	0 of 4	0.65	None
Crop	4 ± 1	0 of 4	0.30	Down
Midgut	2 ± 2	0 of 4	0.20	Down
Tubule	3 ± 0	0 of 4	0.20	Down
Hindgut	3 ± 1	0 of 4	0.20	Down
Heart	0 ± 0	0 of 4	0.04	Down
Fat body	3 ± 2	0 of 4	0.18	Down
Ovary	5 ± 1	0 of 4	0.30	Down
Testis	239 ± 4	4 of 4	13.80	Up
Male accessory glands	7 ± 2	0 of 4	0.40	Down
Virgin spermatheca	4 ± 0	0 of 4	0.25	Down
Mated spermatheca	1 ± 0	0 of 4	0.07	Down
Adult carcass	1 ± 0	0 of 4	0.10	Down
Larval CNS	2 ± 2	0 of 4	0.13	Down
Larval Salivary gland	6 ± 2	1 of 4	0.40	Down
Larval midgut	2 ± 1	0 of 4	0.17	Down
Larval tubule	0 ± 0	0 of 4	0.00	Down
Larval hindgut	2 ± 1	0 of 4	0.17	Down
Larval fat body	39 ± 18	3 of 4	2.30	None
Larval trachea	2 ± 2	0 of 4	0.13	Down
Larval carcass	3 ± 1	0 of 4	0.19	Down
S2 cells (growing)	1 ± 0	0 of 4	0.08	Down
Whole fly	17 ± 1	3 of 4

Looking for FBgn0032522. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720