FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032523 through 18771 annotations produced 1 hits

(CG16956):

Annotation Number : CG16956
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032523
Gbrowse : chr2L:13413860-13414516 (-) // 100.0 //
Probeset : 1635602_at
Accessions : protein= NP_609654;, nucleotide= NM_135810;
FlyMine data for FBgn0032523.
VDRC has 2 RNAi stocks for FBgn0032523 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	1 of 4	0.20	Down
Head	6 ± 1	0 of 4	0.20	Down
Eye	1 ± 0	0 of 4	0.06	Down
Thoracicoabdominal ganglion	7 ± 1	0 of 4	0.30	Down
Salivary gland	16 ± 5	2 of 4	0.61	None
Crop	6 ± 1	1 of 4	0.20	Down
Midgut	5 ± 2	0 of 4	0.20	Down
Tubule	4 ± 0	0 of 4	0.20	Down
Hindgut	5 ± 0	0 of 4	0.20	Down
Heart	4 ± 0	0 of 4	0.15	Down
Fat body	9 ± 5	2 of 4	0.35	Down
Ovary	71 ± 8	4 of 4	2.60	Up
Testis	1 ± 0	0 of 4	0.10	Down
Male accessory glands	13 ± 1	2 of 4	0.50	None
Virgin spermatheca	5 ± 1	0 of 4	0.20	Down
Mated spermatheca	4 ± 1	0 of 4	0.17	Down
Adult carcass	12 ± 3	2 of 4	0.50	None
Larval CNS	4 ± 3	0 of 4	0.17	Down
Larval Salivary gland	1 ± 0	0 of 4	0.07	Down
Larval midgut	8 ± 1	0 of 4	0.32	Down
Larval tubule	7 ± 1	0 of 4	0.30	Down
Larval hindgut	6 ± 0	1 of 4	0.25	Down
Larval fat body	9 ± 0	1 of 4	0.30	Down
Larval trachea	6 ± 4	0 of 4	0.25	Down
Larval carcass	7 ± 2	0 of 4	0.29	Down
S2 cells (growing)	6 ± 0	0 of 4	0.22	Down
Whole fly	27 ± 5	4 of 4

Looking for FBgn0032523. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720