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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032535 through 18771 annotations produced 1 hits



Ance-2 (Ance-2):

Annotation Number : CG16869
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032535
Gbrowse : chr2L:13909639-13911640 (+) // 100.0 //
Probeset : 1636007_at
Accessions : protein= NP_788042;, nucleotide= NM_176028;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0032535.
Homophila reports that CG16869 is a close match (2e-54) to human gene ACE;ACE1;DCP1 (NP_000780), a gene associated with Renal tubular dysgenesis, 267430 (3);[Angiotensin I-converting enzyme, benign serum increase] (3);{Alzheimer disease, susceptibility to}, 104300 (3);{Diabetic nephropathy, susceptibility to}, 603933 (3);{Myocardial infarction, susceptibility to} (3);{SARS, progression of} (3).
BioGrid reports that CG16869 interacts with CG5375 CG8540 .
VDRC has 1 RNAi stocks for FBgn0032535 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.60None
Head3 ± 10 of 4 1.20None
Eye3 ± 10 of 4 1.31None
Thoracicoabdominal ganglion3 ± 10 of 4 1.30None
Salivary gland8 ± 30 of 4 3.14None
Crop6 ± 11 of 4 2.20None
Midgut4 ± 10 of 4 1.50None
Tubule2 ± 00 of 4 1.00None
Hindgut1 ± 00 of 4 0.70None
Heart2 ± 10 of 4 0.80None
Fat body0 ± 00 of 4 0.29None
Ovary0 ± 00 of 4 0.30None
Testis3 ± 00 of 4 1.30None
Male accessory glands3 ± 20 of 4 1.20None
Virgin spermatheca0 ± 00 of 4 0.24None
Mated spermatheca1 ± 00 of 4 0.64None
Adult carcass3 ± 10 of 4 1.20None
Larval CNS0 ± 00 of 4 0.35None
Larval Salivary gland3 ± 10 of 4 1.21None
Larval midgut4 ± 10 of 4 1.60None
Larval tubule3 ± 00 of 4 1.40None
Larval hindgut3 ± 00 of 4 1.14None
Larval fat body2 ± 10 of 4 0.90None
Larval trachea3 ± 30 of 4 1.16None
Larval carcass2 ± 00 of 4 0.94None
S2 cells (growing)2 ± 00 of 4 0.87None
Whole fly2 ± 00 of 4

Looking for FBgn0032535. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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