FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032536 through 18771 annotations produced 2 hits

Ance-3 (Ance-3):

Annotation Number : CG17988
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032536
Gbrowse : chr2L:13914724-13918249 (+) // 100.0 //
Probeset : 1628955_at
Accessions : protein= NP_001033904;, nucleotide= NM_001038815;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0032536.
Homophila reports that CG17988 is a close match (5e-135) to human gene ACE;ACE1;DCP1 (NP_000780), a gene associated with Renal tubular dysgenesis, 267430 (3);[Angiotensin I-converting enzyme, benign serum increase] (3);{Alzheimer disease, susceptibility to}, 104300 (3);{Diabetic nephropathy, susceptibility to}, 603933 (3);{Myocardial infarction, susceptibility to} (3);{SARS, progression of} (3).
BioGrid reports that CG17988 interacts with CG3376 .
VDRC has 5 RNAi stocks for FBgn0032536 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	0 of 4	0.20	Down
Head	32 ± 2	4 of 4	3.30	Up
Eye	10 ± 2	3 of 4	1.09	None
Thoracicoabdominal ganglion	3 ± 1	0 of 4	0.40	Down
Salivary gland	9 ± 2	0 of 4	0.98	None
Crop	3 ± 0	0 of 4	0.30	Down
Midgut	3 ± 1	0 of 4	0.30	Down
Tubule	3 ± 0	0 of 4	0.30	Down
Hindgut	7 ± 1	0 of 4	0.80	None
Heart	3 ± 1	0 of 4	0.40	Down
Fat body	5 ± 0	0 of 4	0.52	Down
Ovary	3 ± 0	0 of 4	0.30	Down
Testis	2 ± 0	0 of 4	0.30	Down
Male accessory glands	2 ± 0	0 of 4	0.20	Down
Virgin spermatheca	8 ± 2	3 of 4	0.90	None
Mated spermatheca	14 ± 2	3 of 4	1.44	None
Adult carcass	25 ± 3	3 of 4	2.50	Up
Larval CNS	1 ± 1	0 of 4	0.12	Down
Larval Salivary gland	3 ± 0	0 of 4	0.32	Down
Larval midgut	1 ± 0	0 of 4	0.17	Down
Larval tubule	3 ± 0	0 of 4	0.30	Down
Larval hindgut	2 ± 0	0 of 4	0.20	Down
Larval fat body	7 ± 3	0 of 4	0.80	None
Larval trachea	1 ± 0	0 of 4	0.15	Down
Larval carcass	4 ± 1	0 of 4	0.43	Down
S2 cells (growing)	2 ± 1	0 of 4	0.29	Down
Whole fly	9 ± 1	2 of 4

Ance-3 (Ance-3):

Annotation Number : CG31766
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032536
Gbrowse : chr2L:13954635-13955743 (+) // 97.82 //
Probeset : 1637714_a_at
Accessions : protein= NP_001033904;, nucleotide= NM_001038815;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0032536.
VDRC has 5 RNAi stocks for FBgn0032536 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	6 ± 1	1 of 4	0.20	Down
Head	133 ± 2	4 of 4	4.30	Up
Eye	80 ± 6	4 of 4	2.56	Up
Thoracicoabdominal ganglion	7 ± 2	1 of 4	0.20	Down
Salivary gland	29 ± 0	0 of 4	0.95	None
Crop	3 ± 0	0 of 4	0.10	Down
Midgut	5 ± 1	0 of 4	0.20	Down
Tubule	11 ± 1	1 of 4	0.40	Down
Hindgut	24 ± 1	4 of 4	0.80	None
Heart	7 ± 2	2 of 4	0.25	Down
Fat body	17 ± 5	3 of 4	0.57	None
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	5 ± 1	0 of 4	0.20	Down
Male accessory glands	4 ± 2	0 of 4	0.10	Down
Virgin spermatheca	189 ± 20	4 of 4	6.05	Up
Mated spermatheca	305 ± 29	4 of 4	9.74	Up
Adult carcass	88 ± 10	4 of 4	2.80	Up
Larval CNS	11 ± 5	1 of 4	0.38	Down
Larval Salivary gland	10 ± 1	0 of 4	0.34	Down
Larval midgut	4 ± 1	0 of 4	0.14	Down
Larval tubule	9 ± 1	0 of 4	0.30	Down
Larval hindgut	6 ± 1	0 of 4	0.22	Down
Larval fat body	5 ± 2	0 of 4	0.20	Down
Larval trachea	17 ± 2	4 of 4	0.56	None
Larval carcass	13 ± 1	3 of 4	0.43	Down
S2 cells (growing)	0 ± 0	0 of 4	0.02	Down
Whole fly	31 ± 4	4 of 4

Looking for FBgn0032536. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720