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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0032582 through 18771 annotations produced 1 hits


Annotation Number : CG13258
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032582
Gbrowse : chr2L:16292126-16292970 (-) // 100.0 //
Probeset : 1632864_at
Accessions : protein= NP_609785;, nucleotide= NM_135941;
FlyMine data for FBgn0032582.
VDRC has 2 RNAi stocks for FBgn0032582 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 10 of 4 1.40None
Head5 00 of 4 1.30None
Eye4 10 of 4 0.95None
Thoracicoabdominal ganglion6 10 of 4 1.40None
Salivary gland13 20 of 4 3.00Up
Crop6 10 of 4 1.50None
Midgut7 20 of 4 1.70None
Tubule6 10 of 4 1.40None
Hindgut4 20 of 4 1.00None
Heart5 20 of 4 1.31None
Fat body9 20 of 4 2.14Up
Ovary6 11 of 4 1.30None
Testis5 00 of 4 1.30None
Male accessory glands8 11 of 4 1.90None
Virgin spermatheca3 10 of 4 0.81None
Mated spermatheca1 00 of 4 0.38None
Adult carcass9 20 of 4 2.10None
Larval CNS5 20 of 4 1.23None
Larval Salivary gland14 30 of 4 3.08None
Larval midgut9 10 of 4 1.98None
Larval tubule3 00 of 4 0.80None
Larval hindgut6 00 of 4 1.38None
Larval fat body11 31 of 4 2.50None
Larval trachea10 30 of 4 2.34Up
Larval carcass9 21 of 4 2.19None
S2 cells (growing)7 10 of 4 1.74None
Whole fly4 10 of 4

Looking for FBgn0032582. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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