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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032595 through 18771 annotations produced 1 hits



(CG17996):

Annotation Number : CG17996
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032595
Gbrowse : chr2L:16730454-16730960 (-) // 100.0 //
Probeset : 1625088_at
Accessions : protein= NP_609803;, nucleotide= NM_135959;
FlyMine data for FBgn0032595.
VDRC has 1 RNAi stocks for FBgn0032595 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain177 64 of 4 1.10None
Head181 54 of 4 1.10None
Eye157 94 of 4 0.94None
Thoracicoabdominal ganglion210 194 of 4 1.30None
Salivary gland115 44 of 4 0.69Down
Crop124 74 of 4 0.70Down
Midgut190 124 of 4 1.10None
Tubule145 74 of 4 0.90Down
Hindgut268 14 of 4 1.60Up
Heart251 204 of 4 1.50Up
Fat body165 264 of 4 0.99None
Ovary121 24 of 4 0.70Down
Testis122 64 of 4 0.70Down
Male accessory glands183 144 of 4 1.10None
Virgin spermatheca75 54 of 4 0.45Down
Mated spermatheca86 53 of 4 0.51Down
Adult carcass235 54 of 4 1.40Up
Larval CNS98 134 of 4 0.59Down
Larval Salivary gland247 194 of 4 1.48Up
Larval midgut221 104 of 4 1.32Up
Larval tubule235 44 of 4 1.40Up
Larval hindgut204 04 of 4 1.22Up
Larval fat body154 74 of 4 0.90None
Larval trachea191 124 of 4 1.14Up
Larval carcass192 204 of 4 1.15None
S2 cells (growing)146 34 of 4 0.87Down
Whole fly167 24 of 4

Looking for FBgn0032595. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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