FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032601 through 18771 annotations produced 1 hits

yellow-b (yellow-b):

Annotation Number : CG17914
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032601
Gbrowse : chr2L:16754335-16758283 (+) // 100.0 //
Probeset : 1628927_at
Accessions : protein= NP_523586;, nucleotide= NM_078862;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0032601.
BDGP gene expression has embryonic in situ data for yellow-b: 50 pix of staining in 7 body parts.
BioGrid reports that CG17914 interacts with CG7454 .
VDRC has 1 RNAi stocks for FBgn0032601 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	23 ± 2	4 of 4	0.60	Down
Head	114 ± 13	4 of 4	3.10	Up
Eye	7 ± 1	1 of 4	0.21	Down
Thoracicoabdominal ganglion	70 ± 5	4 of 4	1.90	Up
Salivary gland	21 ± 2	0 of 4	0.58	Down
Crop	92 ± 10	4 of 4	2.50	Up
Midgut	14 ± 1	0 of 4	0.40	Down
Tubule	8 ± 1	0 of 4	0.20	Down
Hindgut	1178 ± 33	4 of 4	32.00	Up
Heart	9 ± 1	1 of 4	0.26	Down
Fat body	16 ± 3	2 of 4	0.44	Down
Ovary	4 ± 1	0 of 4	0.10	Down
Testis	3 ± 0	0 of 4	0.10	Down
Male accessory glands	13 ± 2	0 of 4	0.40	Down
Virgin spermatheca	26 ± 3	3 of 4	0.71	None
Mated spermatheca	32 ± 4	4 of 4	0.87	None
Adult carcass	158 ± 13	4 of 4	4.30	Up
Larval CNS	3 ± 2	0 of 4	0.08	Down
Larval Salivary gland	19 ± 3	2 of 4	0.52	Down
Larval midgut	21 ± 3	2 of 4	0.57	Down
Larval tubule	7 ± 1	0 of 4	0.20	Down
Larval hindgut	170 ± 9	4 of 4	4.65	Up
Larval fat body	8 ± 2	0 of 4	0.20	Down
Larval trachea	528 ± 133	4 of 4	14.36	Up
Larval carcass	673 ± 122	4 of 4	18.31	Up
S2 cells (growing)	17 ± 1	4 of 4	0.47	Down
Whole fly	36 ± 2	4 of 4

Looking for FBgn0032601. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720