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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032612 through 18771 annotations produced 1 hits



(CG13282):

Annotation Number : CG13282
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032612
Gbrowse : chr2L:16832192-16833900 (-) // 100.0 //
Probeset : 1633300_at
Accessions : protein= NP_609814;, nucleotide= NM_135970;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004806 // triglyceride lipase activity // infe
FlyMine data for FBgn0032612.
Homophila reports that CG13282 is a close match (7e-22) to human gene HDLCQ11;LIPD;LPL (NP_000228), a gene associated with Combined hyperlipidemia, familial, 144250 (3);Lipoprotein lipase deficiency, 238600 (3);[High density lipoprotein cholesterol level QTL 11] (3).
VDRC has 3 RNAi stocks for FBgn0032612 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.10Down
Head3 10 of 4 0.40Down
Eye3 10 of 4 0.35Down
Thoracicoabdominal ganglion3 10 of 4 0.30Down
Salivary gland3 10 of 4 0.40Down
Crop130 54 of 414.00Up
Midgut13 10 of 4 1.40None
Tubule5 10 of 4 0.60Down
Hindgut8 00 of 4 0.90None
Heart37 44 of 4 4.08Up
Fat body8 30 of 4 0.90None
Ovary7 00 of 4 0.80None
Testis52 24 of 4 5.60Up
Male accessory glands62 44 of 4 6.70Up
Virgin spermatheca6 01 of 4 0.73None
Mated spermatheca5 10 of 4 0.60None
Adult carcass7 20 of 4 0.80None
Larval CNS1 00 of 4 0.18Down
Larval Salivary gland8 10 of 4 0.91None
Larval midgut8 20 of 4 0.88None
Larval tubule2 00 of 4 0.30Down
Larval hindgut4 00 of 4 0.48Down
Larval fat body1 00 of 4 0.20Down
Larval trachea2 10 of 4 0.31Down
Larval carcass8 10 of 4 0.91None
S2 cells (growing)1 00 of 4 0.11Down
Whole fly9 00 of 4

Looking for FBgn0032612. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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