FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032618 through 18771 annotations produced 1 hits

/// (CG31743 /// CG34313):

Annotation Number : CG31743
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032618 /// FBgn0085342
Gbrowse : chr2L:16879516-16886319 (+) // 99.82 //
Probeset : 1626965_at
Accessions : protein= NP_001097169; /// NP_609820;, nucleotide= NM_001103699; /// NM_135976;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0008146 // sulfotransferase activity // inferred fr
FlyMine data for FBgn0032618 /// FBgn0085342.
BioGrid reports that CG31743 interacts with CG5390 CG5642 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	110 ± 6	4 of 4	0.50	Down
Head	859 ± 19	4 of 4	3.60	Up
Eye	708 ± 52	4 of 4	2.93	Up
Thoracicoabdominal ganglion	256 ± 11	4 of 4	1.10	None
Salivary gland	54 ± 4	4 of 4	0.22	Down
Crop	1421 ± 48	4 of 4	5.90	Up
Midgut	331 ± 9	4 of 4	1.40	Up
Tubule	29 ± 1	4 of 4	0.10	Down
Hindgut	218 ± 11	4 of 4	0.90	None
Heart	528 ± 23	4 of 4	2.19	Up
Fat body	960 ± 28	4 of 4	3.98	Up
Ovary	31 ± 3	4 of 4	0.10	Down
Testis	75 ± 3	4 of 4	0.30	Down
Male accessory glands	83 ± 7	4 of 4	0.30	Down
Virgin spermatheca	1125 ± 83	4 of 4	4.66	Up
Mated spermatheca	774 ± 60	4 of 4	3.21	Up
Adult carcass	979 ± 28	4 of 4	4.10	Up
Larval CNS	126 ± 7	4 of 4	0.53	Down
Larval Salivary gland	64 ± 2	4 of 4	0.27	Down
Larval midgut	435 ± 33	4 of 4	1.80	Up
Larval tubule	18 ± 1	4 of 4	0.10	Down
Larval hindgut	82 ± 5	4 of 4	0.34	Down
Larval fat body	610 ± 66	4 of 4	2.50	Up
Larval trachea	82 ± 9	4 of 4	0.34	Down
Larval carcass	70 ± 12	4 of 4	0.29	Down
S2 cells (growing)	265 ± 12	4 of 4	1.10	None
Whole fly	241 ± 8	4 of 4

Looking for FBgn0032618. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720