Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

 University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0032650 through 18771 annotations produced 1 hits


CKIa-like (CG7094):

Annotation Number : CG7094
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032650
Gbrowse : chr2L:17554352-17555765 (-) // 100.0 //
Probeset : 1636753_at
Accessions : protein= NP_609851;, nucleotide= NM_136007;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0032650.
Homophila reports that CG7094 is a close match (2e-35) to human gene SCA11;TTBK2 (NP_775771), a gene associated with Spinocerebellar ataxia-11, 604432 (3).
VDRC has 3 RNAi stocks for FBgn0032650 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.00Down
Head1 ± 00 of 4 0.00Down
Eye1 ± 00 of 4 0.03Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.00Down
Salivary gland16 ± 20 of 4 0.23Down
Crop5 ± 10 of 4 0.10Down
Midgut3 ± 10 of 4 0.00Down
Tubule1 ± 00 of 4 0.00Down
Hindgut3 ± 10 of 4 0.00Down
Heart3 ± 10 of 4 0.05Down
Fat body3 ± 10 of 4 0.04Down
Ovary2 ± 00 of 4 0.00Down
Testis910 ± 424 of 413.20Up
Male accessory glands10 ± 00 of 4 0.10Down
Virgin spermatheca1 ± 00 of 4 0.02Down
Mated spermatheca3 ± 20 of 4 0.05Down
Adult carcass3 ± 10 of 4 0.10Down
Larval CNS1 ± 10 of 4 0.02Down
Larval Salivary gland5 ± 20 of 4 0.07Down
Larval midgut1 ± 00 of 4 0.02Down
Larval tubule5 ± 00 of 4 0.10Down
Larval hindgut2 ± 00 of 4 0.04Down
Larval fat body85 ± 413 of 4 1.20None
Larval trachea6 ± 31 of 4 0.10Down
Larval carcass1 ± 00 of 4 0.03Down
S2 cells (growing)1 ± 00 of 4 0.02Down
Whole fly69 ± 24 of 4

Looking for FBgn0032650. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime