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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032652 through 18771 annotations produced 1 hits



cytochrome B5 (CG6870):

Annotation Number : CG6870
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032652
Gbrowse : chr2L:17591446-17592298 (-) // 100.0 //
Probeset : 1629324_at
Accessions : protein= NP_609852;, nucleotide= NM_136008;
Pathway : 0005792 // microsome // inferred from sequence or structural similarity
Interpro : 0009055 // electron carrier activity // inferred from sequence or structural similarity /// 0020037 // heme binding // i
FlyMine data for FBgn0032652.
BDGP gene expression has embryonic in situ data for CG6870: 27 pix of staining in 4 body parts.
Homophila reports that CG6870 is a close match (4e-15) to human gene CYB5A;MCB5 (NP_001905), a gene associated with Methemoglobinemia due to cytochrome b5 deficiency (3).
VDRC has 3 RNAi stocks for FBgn0032652 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 ± 00 of 4 0.00Down
Head1940 ± 404 of 411.10Up
Eye5239 ± 1644 of 429.95Up
Thoracicoabdominal ganglion7 ± 30 of 4 0.00Down
Salivary gland3 ± 10 of 4 0.02Down
Crop10 ± 21 of 4 0.10Down
Midgut4 ± 20 of 4 0.00Down
Tubule6 ± 20 of 4 0.00Down
Hindgut14 ± 14 of 4 0.10Down
Heart361 ± 204 of 4 2.07Up
Fat body1316 ± 2264 of 4 7.53Up
Ovary1 ± 00 of 4 0.00Down
Testis7 ± 02 of 4 0.00Down
Male accessory glands5 ± 10 of 4 0.00Down
Virgin spermatheca629 ± 574 of 4 3.60Up
Mated spermatheca1310 ± 1884 of 4 7.49Up
Adult carcass380 ± 304 of 4 2.20Up
Larval CNS1 ± 00 of 4 0.01Down
Larval Salivary gland18 ± 62 of 4 0.10Down
Larval midgut3 ± 20 of 4 0.02Down
Larval tubule6 ± 21 of 4 0.00Down
Larval hindgut5 ± 10 of 4 0.03Down
Larval fat body4046 ± 5254 of 423.10Up
Larval trachea117 ± 2242 of 4 0.67None
Larval carcass3 ± 00 of 4 0.02Down
S2 cells (growing)3 ± 10 of 4 0.02Down
Whole fly174 ± 154 of 4

Looking for FBgn0032652. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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