FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032658 through 18771 annotations produced 1 hits

(CG5681):

Annotation Number : CG5681
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032658
Gbrowse : chr2L:17986527-17988218 (+) // 100.0 //
Probeset : 1627307_at
Accessions : protein= NP_609858;, nucleotide= NM_136014;
FlyMine data for FBgn0032658.
BioGrid reports that CG5681 interacts with CG7834 .
VDRC has 2 RNAi stocks for FBgn0032658 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.20	Down
Head	2 ± 1	0 of 4	0.20	Down
Eye	4 ± 1	2 of 4	0.30	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.10	Down
Salivary gland	6 ± 1	1 of 4	0.51	Down
Crop	6 ± 1	1 of 4	0.50	Down
Midgut	2 ± 1	0 of 4	0.20	Down
Tubule	4 ± 0	0 of 4	0.30	Down
Hindgut	3 ± 1	0 of 4	0.20	Down
Heart	0 ± 0	0 of 4	0.04	Down
Fat body	19 ± 4	4 of 4	1.43	None
Ovary	0 ± 0	0 of 4	0.00	Down
Testis	270 ± 12	4 of 4	20.30	Up
Male accessory glands	13 ± 2	2 of 4	1.00	None
Virgin spermatheca	8 ± 1	3 of 4	0.65	Down
Mated spermatheca	7 ± 1	2 of 4	0.58	Down
Adult carcass	2 ± 1	0 of 4	0.20	Down
Larval CNS	4 ± 2	3 of 4	0.36	Down
Larval Salivary gland	4 ± 0	0 of 4	0.36	Down
Larval midgut	3 ± 1	0 of 4	0.29	Down
Larval tubule	4 ± 1	2 of 4	0.30	Down
Larval hindgut	2 ± 0	1 of 4	0.17	Down
Larval fat body	58 ± 28	3 of 4	4.40	None
Larval trachea	5 ± 1	2 of 4	0.44	Down
Larval carcass	0 ± 0	0 of 4	0.03	Down
S2 cells (growing)	1 ± 0	0 of 4	0.11	Down
Whole fly	13 ± 1	4 of 4

Looking for FBgn0032658. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720