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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032665 through 18771 annotations produced 1 hits



(CG15152):

Annotation Number : CG15152
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032665
Gbrowse : chr2L:18114682-18115021 (+) // 100.0 //
Probeset : 1633949_at
Accessions : protein= NP_609865;, nucleotide= NM_136021;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0032665.
BioGrid reports that CG15152 interacts with CG2774 CG9893 CG5094 CG7919 CG9392 .
VDRC has 3 RNAi stocks for FBgn0032665 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.00Down
Head5 ± 20 of 4 0.00Down
Eye5 ± 22 of 4 0.04Down
Thoracicoabdominal ganglion4 ± 10 of 4 0.00Down
Salivary gland10 ± 31 of 4 0.07Down
Crop6 ± 11 of 4 0.00Down
Midgut1895 ± 514 of 413.20Up
Tubule259 ± 174 of 4 1.80Up
Hindgut403 ± 114 of 4 2.80Up
Heart2 ± 11 of 4 0.02Down
Fat body10 ± 62 of 4 0.07Down
Ovary1 ± 00 of 4 0.00Down
Testis33 ± 14 of 4 0.20Down
Male accessory glands18 ± 32 of 4 0.10Down
Virgin spermatheca5 ± 00 of 4 0.04Down
Mated spermatheca5 ± 11 of 4 0.04Down
Adult carcass7 ± 20 of 4 0.10Down
Larval CNS4 ± 21 of 4 0.03Down
Larval Salivary gland5 ± 00 of 4 0.04Down
Larval midgut1444 ± 504 of 410.07Up
Larval tubule718 ± 254 of 4 5.00Up
Larval hindgut471 ± 264 of 4 3.29Up
Larval fat body67 ± 144 of 4 0.50Down
Larval trachea5 ± 31 of 4 0.04Down
Larval carcass22 ± 14 of 4 0.15Down
S2 cells (growing)4 ± 10 of 4 0.03Down
Whole fly143 ± 204 of 4

Looking for FBgn0032665. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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