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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032677 through 18771 annotations produced 1 hits



CDC 7-related (CG5790):

Annotation Number : CG5790
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032677
Gbrowse : chr2L:18294903-18297261 (+) // 99.33 //
Probeset : 1625789_at
Accessions : protein= NP_609876;, nucleotide= NM_136032;
Pathway : engulfment // inferred from mutant phenotype /// 0008360 // regulation of cell shape // inferred from mutant phenotype"
FlyMine data for FBgn0032677.
VDRC has 4 RNAi stocks for FBgn0032677 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 10 of 4 0.00Down
Head1 00 of 4 0.00Down
Eye5 11 of 4 0.05Down
Thoracicoabdominal ganglion4 00 of 4 0.00Down
Salivary gland12 50 of 4 0.12Down
Crop3 10 of 4 0.00Down
Midgut3 10 of 4 0.00Down
Tubule8 10 of 4 0.10Down
Hindgut5 00 of 4 0.00Down
Heart2 00 of 4 0.03Down
Fat body12 62 of 4 0.12Down
Ovary2 00 of 4 0.00Down
Testis1355 714 of 412.70Up
Male accessory glands8 20 of 4 0.10Down
Virgin spermatheca17 33 of 4 0.17Down
Mated spermatheca30 93 of 4 0.29Down
Adult carcass11 20 of 4 0.10Down
Larval CNS10 33 of 4 0.09Down
Larval Salivary gland4 10 of 4 0.04Down
Larval midgut2 00 of 4 0.02Down
Larval tubule4 10 of 4 0.00Down
Larval hindgut4 00 of 4 0.04Down
Larval fat body103 603 of 4 1.00None
Larval trachea10 91 of 4 0.09Down
Larval carcass4 00 of 4 0.04Down
S2 cells (growing)2 10 of 4 0.03Down
Whole fly106 54 of 4

Looking for FBgn0032677. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime