FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0032691 through 18771 annotations produced 1 hits

(CG10414):

Annotation Number : CG10414
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032691
Gbrowse : chr2L:18609571-18612242 (-) // 100.0 //
Probeset : 1632308_at
Accessions : protein= NP_609889;, nucleotide= NM_136045;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008080 // N-acetyltransferase activity // inferre
FlyMine data for FBgn0032691.
BDGP gene expression has embryonic in situ data for CG10414: 14 pix of staining in 9 body parts.
BioGrid reports that CG10414 interacts with CG9734 .
TRiP has 1 RNAi stocks for FBgn0032691 available for purchase.
VDRC has 2 RNAi stocks for FBgn0032691 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	59 ± 0	4 of 4	1.30	Up
Head	37 ± 4	4 of 4	0.80	None
Eye	32 ± 4	4 of 4	0.70	None
Thoracicoabdominal ganglion	51 ± 2	4 of 4	1.10	None
Salivary gland	45 ± 9	4 of 4	0.99	None
Crop	51 ± 3	4 of 4	1.10	None
Midgut	43 ± 3	4 of 4	0.90	None
Tubule	26 ± 3	4 of 4	0.60	Down
Hindgut	40 ± 4	4 of 4	0.90	None
Heart	27 ± 1	4 of 4	0.61	Down
Fat body	49 ± 5	4 of 4	1.08	None
Ovary	98 ± 1	4 of 4	2.10	Up
Testis	24 ± 2	4 of 4	0.50	Down
Male accessory glands	64 ± 3	4 of 4	1.40	Up
Virgin spermatheca	47 ± 1	4 of 4	1.03	None
Mated spermatheca	55 ± 3	4 of 4	1.20	None
Adult carcass	38 ± 1	4 of 4	0.80	None
Larval CNS	128 ± 5	4 of 4	2.80	Up
Larval Salivary gland	54 ± 1	4 of 4	1.18	None
Larval midgut	39 ± 2	4 of 4	0.87	None
Larval tubule	34 ± 2	4 of 4	0.80	None
Larval hindgut	37 ± 1	4 of 4	0.81	None
Larval fat body	41 ± 4	4 of 4	0.90	None
Larval trachea	77 ± 3	4 of 4	1.68	Up
Larval carcass	65 ± 4	4 of 4	1.41	Up
S2 cells (growing)	106 ± 2	4 of 4	2.31	Up
Whole fly	46 ± 5	4 of 4

Looking for FBgn0032691. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720