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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032702 through 18771 annotations produced 1 hits



(CG10376):

Annotation Number : CG10376
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032702
Gbrowse : chr2L:18700604-18703118 (-) // 100.0 //
Probeset : 1626553_at
Accessions : protein= NP_609899;, nucleotide= NM_136055;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004722 // protein serine/threonine phosphatase
FlyMine data for FBgn0032702.
BioGrid reports that CG10376 interacts with CG7221 .
TRiP has 1 RNAi stocks for FBgn0032702 available for purchase.
VDRC has 3 RNAi stocks for FBgn0032702 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain226 ± 44 of 4 1.50Up
Head180 ± 114 of 4 1.20None
Eye161 ± 24 of 4 1.08None
Thoracicoabdominal ganglion170 ± 24 of 4 1.10Up
Salivary gland272 ± 74 of 4 1.82Up
Crop321 ± 94 of 4 2.10Up
Midgut151 ± 64 of 4 1.00None
Tubule273 ± 74 of 4 1.80Up
Hindgut204 ± 64 of 4 1.40Up
Heart141 ± 134 of 4 0.94None
Fat body153 ± 214 of 4 1.02None
Ovary220 ± 54 of 4 1.50Up
Testis33 ± 24 of 4 0.20Down
Male accessory glands211 ± 164 of 4 1.40Up
Virgin spermatheca268 ± 164 of 4 1.79Up
Mated spermatheca266 ± 44 of 4 1.77Up
Adult carcass149 ± 64 of 4 1.00None
Larval CNS157 ± 144 of 4 1.05None
Larval Salivary gland162 ± 54 of 4 1.08None
Larval midgut124 ± 73 of 4 0.83Down
Larval tubule227 ± 94 of 4 1.50Up
Larval hindgut172 ± 84 of 4 1.15None
Larval fat body94 ± 54 of 4 0.60Down
Larval trachea184 ± 94 of 4 1.23Up
Larval carcass110 ± 64 of 4 0.74Down
S2 cells (growing)1013 ± 254 of 4 6.75Up
Whole fly150 ± 64 of 4

Looking for FBgn0032702. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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