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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0032705 through 18771 annotations produced 1 hits



Grip71 (Grip71):

Annotation Number : CG10346
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032705
Gbrowse : chr2L:18708848-18711305 (+) // 100.0 //
Probeset : 1632875_at
Accessions : protein= NP_609902;, nucleotide= NM_136058;
Pathway : 0008274 // gamma-tubulin ring complex // inferred from direct assay /// 0008274 // gamma-tubulin ring complex // non-tra
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0043015 // gamma-tubulin binding // inferred from d
FlyMine data for FBgn0032705.
BDGP gene expression has embryonic in situ data for CG10346: 9 pix of staining in 2 body parts.
BioGrid reports that CG10346 interacts with CG7210 CG11248 CG11449 CG1212 CG14478 CG2204 CG32772 CG7352 .
VDRC has 2 RNAi stocks for FBgn0032705 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain28 ± 14 of 4 0.30Down
Head14 ± 13 of 4 0.10Down
Eye13 ± 04 of 4 0.12Down
Thoracicoabdominal ganglion33 ± 24 of 4 0.30Down
Salivary gland19 ± 21 of 4 0.17Down
Crop16 ± 11 of 4 0.10Down
Midgut10 ± 20 of 4 0.10Down
Tubule15 ± 33 of 4 0.10Down
Hindgut10 ± 12 of 4 0.10Down
Heart8 ± 12 of 4 0.07Down
Fat body8 ± 32 of 4 0.08Down
Ovary249 ± 34 of 4 2.20Up
Testis82 ± 44 of 4 0.70Down
Male accessory glands11 ± 12 of 4 0.10Down
Virgin spermatheca7 ± 00 of 4 0.06Down
Mated spermatheca7 ± 10 of 4 0.06Down
Adult carcass16 ± 42 of 4 0.10Down
Larval CNS107 ± 84 of 4 0.96None
Larval Salivary gland19 ± 22 of 4 0.17Down
Larval midgut10 ± 10 of 4 0.09Down
Larval tubule22 ± 14 of 4 0.20Down
Larval hindgut15 ± 03 of 4 0.14Down
Larval fat body32 ± 54 of 4 0.30Down
Larval trachea47 ± 44 of 4 0.42Down
Larval carcass18 ± 20 of 4 0.16Down
S2 cells (growing)125 ± 34 of 4 1.12None
Whole fly112 ± 34 of 4

Looking for FBgn0032705. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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